Aliases for ENSG00000260740 Gene

Subcategory (RNA class) for ENSG00000260740 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000260740 Gene

  • Novel Transcript, Antisense To SLC5A2 5
  • Lnc-C16orf58-1 168
  • NONHSAG019158 92
  • AC026471.3 5

External Ids for ENSG00000260740 Gene

Previous GeneCards Identifiers for ENSG00000260740 Gene

  • GC16M031502
  • GC16M031491

Summaries for ENSG00000260740 Gene

GeneCards Summary for ENSG00000260740 Gene

ENSG00000260740 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260740 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260740 Gene

Genomics for ENSG00000260740 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260740 Gene

Promoters and enhancers for ENSG00000260740 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J031487 Promoter/Enhancer 1 Ensembl ENCODE 514.2 +0.7 691 2 POLR2A EZH2 MYC RBM14 YY1 POLR2G KLF8 KLF9 TAF15 NR3C1 ENSG00000260740 SETD1A SRCAP FUS ZNF764 RNF40 KAT8 FBRS C16orf58 ZNF747
GH16J031456 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 17.7 +29.7 29663 4.9 EP300 FOXK2 ZBTB40 ZNF217 CTCF SIN3A NRF1 MYC TCF12 POLR2G ARMC5 ENSG00000260267 piR-52379 ENSG00000260740 SRCAP FUS KAT8 ZNF843 ZNF720 SETD1A
GH16J031441 Promoter/Enhancer 2 Ensembl ENCODE CraniofacialAtlas dbSUPER 21.1 +45.7 45687 1.8 ZNF217 CTCF NRF1 TCF12 POLR2G PHF8 POLR2A ZBTB26 SAP30 REST ZNF843 ENSG00000260740 lnc-COX6A2-1
GH16J031470 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 18.9 +15.5 15541 4.8 CTCF PHF8 POLR2A AFF1 ZBTB26 MYC CTBP1 NFYB HDAC2 SRSF1 ENSG00000280132 HSALNG0110869 TGFB1I1 ENSG00000260740 HERC2P4 NONHSAG019156.2
GH16J031475 Promoter/Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas 22.9 +11.0 10976 2.6 FOXK2 CTCF NRF1 POLR2G NCOR1 PHB2 KDM6A ZBTB11 RFX1 ZBTB25 NONHSAG019156.2 ENSG00000260740 SLC5A2 TGFB1I1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260740 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260740 Gene

Genomic Locations for ENSG00000260740 Gene
chr16:31,487,370-31,488,492
(GRCh38/hg38)
Size:
1,123 bases
Orientation:
Minus strand
chr16:31,498,691-31,499,813
(GRCh37/hg19)
Size:
1,123 bases
Orientation:
Minus strand

Genomic View for ENSG00000260740 Gene

Genes around ENSG00000260740 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260740 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260740 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260740 Gene

Proteins for ENSG00000260740 Gene

Post-translational modifications for ENSG00000260740 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260740 Gene

Domains & Families for ENSG00000260740 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260740 Gene

Function for ENSG00000260740 Gene

Phenotypes From GWAS Catalog for ENSG00000260740 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260740 Gene

Localization for ENSG00000260740 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260740 Gene

Pathways & Interactions for ENSG00000260740 Gene

PathCards logo

SuperPathways for ENSG00000260740 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000260740 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260740 Gene

Drugs & Compounds for ENSG00000260740 Gene

No Compound Related Data Available

Transcripts for ENSG00000260740 Gene

mRNA/cDNA for ENSG00000260740 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260740 Gene

No ASD Table

Relevant External Links for ENSG00000260740 Gene

GeneLoc Exon Structure for
ENSG00000260740

Expression for ENSG00000260740 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260740 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000260740 Gene

This gene is overexpressed in Testis (x20.8) and Kidney - Cortex (x20.6).
genes like me logo Genes that share expression patterns with ENSG00000260740: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260740 Gene

Orthologs for ENSG00000260740 Gene

Evolution for ENSG00000260740 Gene

ENSEMBL:
Gene Tree for ENSG00000260740 (if available)
TreeFam:
Gene Tree for ENSG00000260740 (if available)

No data available for Orthologs for ENSG00000260740 Gene

Paralogs for ENSG00000260740 Gene

No data available for Paralogs for ENSG00000260740 Gene

Variants for ENSG00000260740 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260740 Gene

Disorders for ENSG00000260740 Gene

No disorders were found for ENSG00000260740 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260740 Gene

Publications for ENSG00000260740 Gene

No publications were found for ENSG00000260740 Gene.

No data available for Mastermind for ENSG00000260740 Gene

Products for ENSG00000260740 Gene

Sources for ENSG00000260740 Gene