Aliases for ENSG00000260733 Gene

Subcategory (RNA class) for ENSG00000260733 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000260733 Gene

  • Novel Transcript, Antisense To WWOX 5
  • NONHSAG020055.2 91
  • Lnc-ADAMTS18-6 165
  • HSALNG0112867 164
  • AC046158.1 5

External Ids for ENSG00000260733 Gene

Previous GeneCards Identifiers for ENSG00000260733 Gene

  • GC16M078529

Summaries for ENSG00000260733 Gene

GeneCards Summary for ENSG00000260733 Gene

ENSG00000260733 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260733 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260733 Gene

Genomics for ENSG00000260733 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000260733 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J078504 Promoter/Enhancer 1.1 Ensembl ENCODE 600.7 +1.0 975 3.1 GATAD2A RBFOX2 CTCF SOX13 TAF1 ZKSCAN8 MAFF KAT7 YY1 EP300 ENSG00000260733 lnc-ADAMTS18-11 WWOX
GH16J078511 Enhancer 0.6 UCNEbase Ensembl 0.7 -4.9 -4933 1.4 ZBTB40 ENSG00000260733 ENSG00000279887 WWOX
GH16J078503 Enhancer 0.6 ENCODE 0.7 +2.9 2859 0.2 CTCF REST RAD21 TRIM22 SMC3 ZNF654 CHD4 KDM1A MAX ZNF143 ENSG00000260733 lnc-ADAMTS18-11 WWOX
GH16J078476 Enhancer 0.8 VISTA UCNEbase 0.3 +29.2 29189 1.3 RNF2 lnc-ADAMTS18-11 ENSG00000260733 WWOX
GH16J078505 Enhancer 0.3 Ensembl 0.7 +3.5 3467 0.6 CTCF CHD4 ENSG00000260733 lnc-ADAMTS18-11 WWOX
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260733 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000260733 Gene

Genomic Locations for ENSG00000260733 Gene
chr16:78,495,926-78,506,568
(GRCh38/hg38)
Size:
10,643 bases
Orientation:
Minus strand
chr16:78,529,823-78,540,465
(GRCh37/hg19)
Size:
10,643 bases
Orientation:
Minus strand

Genomic View for ENSG00000260733 Gene

Genes around ENSG00000260733 on UCSC Golden Path with GeneCards custom track
ENSG00000260733 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000260733 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260733 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260733 Gene

Proteins for ENSG00000260733 Gene

Post-translational modifications for ENSG00000260733 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260733 Gene

Domains & Families for ENSG00000260733 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260733 Gene

Function for ENSG00000260733 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260733 Gene

Localization for ENSG00000260733 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260733 Gene

Pathways & Interactions for ENSG00000260733 Gene

PathCards logo

SuperPathways for ENSG00000260733 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000260733 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260733 Gene

Drugs & Compounds for ENSG00000260733 Gene

No Compound Related Data Available

Transcripts for ENSG00000260733 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000260733 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001A231E_9606 lncRNA 719 3

Ensembl: ENST00000563408 (view in UCSC) ,

LNCipedia: lnc-ADAMTS18-6:1,

NONCODE: NONHSAT143827.2,

URS00009B11EB_9606 lncRNA 400 2

LncBook: HSALNT0233864,

NONCODE: NONHSAT174074.1,

ENSG00000260733 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260733 Gene

No ASD Table

Relevant External Links for ENSG00000260733 Gene

GeneLoc Exon Structure for
ENSG00000260733

No data available for mRNA/cDNA for ENSG00000260733 Gene

Expression for ENSG00000260733 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260733 Gene

genes like me logo Genes that share expression patterns with ENSG00000260733: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260733 Gene

Orthologs for ENSG00000260733 Gene

Evolution for ENSG00000260733 Gene

ENSEMBL:
Gene Tree for ENSG00000260733 (if available)
TreeFam:
Gene Tree for ENSG00000260733 (if available)

No data available for Orthologs for ENSG00000260733 Gene

Paralogs for ENSG00000260733 Gene

No data available for Paralogs for ENSG00000260733 Gene

Variants for ENSG00000260733 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260733 Gene

Disorders for ENSG00000260733 Gene

Additional Disease Information for ENSG00000260733

No disorders were found for ENSG00000260733 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000260733 Gene

Publications for ENSG00000260733 Gene

No publications were found for ENSG00000260733 Gene.

No data available for Mastermind for ENSG00000260733 Gene

Products for ENSG00000260733 Gene

Sources for ENSG00000260733 Gene