Aliases for ENSG00000260695 Gene

Subcategory (RNA class) for ENSG00000260695 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000260695 Gene

  • Novel Transcript 5
  • NONHSAG019671.2 91
  • AC022164.1 5
  • Lnc-TK2-7 165

External Ids for ENSG00000260695 Gene

Previous GeneCards Identifiers for ENSG00000260695 Gene

  • GC16M065895

Summaries for ENSG00000260695 Gene

GeneCards Summary for ENSG00000260695 Gene

ENSG00000260695 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260695 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260695 Gene

Genomics for ENSG00000260695 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000260695 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J066129 Enhancer 0.9 FANTOM5 Ensembl ENCODE 7.2 -267.8 -267762 3.7 SCRT2 JUND CEBPB NFE2 FOS CREB1 BHLHE40 HLF NFE2L2 ENSG00000260695 LINC00922 lnc-TK2-4 lnc-CDH5-16 CDH5
GH16J066150 Enhancer 0.6 Ensembl ENCODE 8.3 -288.9 -288917 5.4 MNT CEBPB TEAD1 SPI1 ZFP64 HLF ENSG00000260695 HSALNG0112074 MF281430-027 CDH5
GH16J066128 Enhancer 0.6 Ensembl ENCODE 6.5 -264.5 -264517 2.2 CTCF NR2F2 EZH2 GLIS1 ENSG00000260695 LINC00922 lnc-TK2-4 lnc-CDH5-16 CDH5
GH16J066133 Enhancer 0.6 Ensembl ENCODE 6.7 -271.0 -271026 2.8 CEBPB USF1 NR2F2 LOC105371316 lnc-TK2-4 ENSG00000260695 CDH5
GH16J066116 Enhancer 0.4 Ensembl 6.9 -252.8 -252817 0.8 FOS FOSL1 ZBTB40 CBFA2T3 ENSG00000260695 lnc-TK2-4 lnc-CDH5-16 CDH5 CDH11
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260695 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000260695 Gene

Genomic Locations for ENSG00000260695 Gene
chr16:65,861,112-65,863,784
(GRCh38/hg38)
Size:
2,673 bases
Orientation:
Minus strand
chr16:65,895,015-65,897,687
(GRCh37/hg19)
Size:
2,673 bases
Orientation:
Minus strand

Genomic View for ENSG00000260695 Gene

Genes around ENSG00000260695 on UCSC Golden Path with GeneCards custom track
ENSG00000260695 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000260695 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260695 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260695 Gene

Proteins for ENSG00000260695 Gene

Post-translational modifications for ENSG00000260695 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260695 Gene

Domains & Families for ENSG00000260695 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260695 Gene

Function for ENSG00000260695 Gene

Phenotypes From GWAS Catalog for ENSG00000260695 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260695 Gene

Localization for ENSG00000260695 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260695 Gene

Pathways & Interactions for ENSG00000260695 Gene

PathCards logo

SuperPathways for ENSG00000260695 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000260695 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260695 Gene

Drugs & Compounds for ENSG00000260695 Gene

No Compound Related Data Available

Transcripts for ENSG00000260695 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000260695 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002B6384_9606 lncRNA 2673 3

Ensembl: ENST00000568767 (view in UCSC) ,

LNCipedia: lnc-TK2-7:1,

NONCODE: NONHSAT142986.2,

ENSG00000260695 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260695 Gene

No ASD Table

Relevant External Links for ENSG00000260695 Gene

GeneLoc Exon Structure for
ENSG00000260695

No data available for mRNA/cDNA for ENSG00000260695 Gene

Expression for ENSG00000260695 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260695 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000260695 Gene

This gene is overexpressed in Lung (x39.1).
genes like me logo Genes that share expression patterns with ENSG00000260695: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260695 Gene

Orthologs for ENSG00000260695 Gene

Evolution for ENSG00000260695 Gene

ENSEMBL:
Gene Tree for ENSG00000260695 (if available)
TreeFam:
Gene Tree for ENSG00000260695 (if available)

No data available for Orthologs for ENSG00000260695 Gene

Paralogs for ENSG00000260695 Gene

No data available for Paralogs for ENSG00000260695 Gene

Variants for ENSG00000260695 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260695 Gene

Disorders for ENSG00000260695 Gene

Additional Disease Information for ENSG00000260695

No disorders were found for ENSG00000260695 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000260695 Gene

Publications for ENSG00000260695 Gene

No publications were found for ENSG00000260695 Gene.

No data available for Mastermind for ENSG00000260695 Gene

Products for ENSG00000260695 Gene

Sources for ENSG00000260695 Gene