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Aliases for ENSG00000260681 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000260681 Gene

  • Novel Transcript, Antisense To TMC5 5
  • AC130456.4 5

External Ids for ENSG00000260681 Gene

Summaries for ENSG00000260681 Gene

GeneCards Summary for ENSG00000260681 Gene

ENSG00000260681 is an RNA Gene.

Additional gene information for ENSG00000260681 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000260681 Gene

Genomics for ENSG00000260681 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260681 Gene

Promoters and enhancers for ENSG00000260681 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J019409 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 600.7 +0.8 762 1.8 ZNF121 ZSCAN21 KLF14 GLIS2 ZBTB8A ZNF600 PRDM10 ZIC2 ZEB2 ATF7 TMC5 ENSG00000260681 SYT17 ENSG00000259925 KNOP1
GH16J019412 Enhancer 0.9 ENCODE dbSUPER 600.7 -1.8 -1792 1.2 CEBPG ZNF384 SP1 DPF2 CEBPA CTCF CEBPB SMARCA5 ZKSCAN1 TEAD1 ENSG00000260681 TMC5 SYT17 GC16P019423
GH16J019411 Enhancer 0.2 ENCODE 600.7 -0.3 -251 0.1 ENSG00000260681 TMC5 GC16P019423
GH16J019416 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.4 -6.9 -6924 4.2 ZNF384 MAFK IKZF1 REST BRCA1 CEBPB SCRT2 CTCF JUN SP1 TMC5 SYT17 ENSG00000259925 GC16P019423 ENSG00000260681
GH16J019415 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.7 -4.1 -4050 1 CEBPA PKNOX1 ENSG00000260681 GC16P019423 TMC5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260681 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260681 Gene

Genomic Locations for ENSG00000260681 Gene
chr16:19,410,729-19,411,662
(GRCh38/hg38)
Size:
934 bases
Orientation:
Minus strand
chr16:19,422,051-19,422,984
(GRCh37/hg19)
Size:
934 bases
Orientation:
Minus strand

Genomic View for ENSG00000260681 Gene

Genes around ENSG00000260681 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260681 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260681 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260681 Gene

Proteins for ENSG00000260681 Gene

Post-translational modifications for ENSG00000260681 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260681 Gene

Domains & Families for ENSG00000260681 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000260681 Gene

Function for ENSG00000260681 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260681 Gene

Localization for ENSG00000260681 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260681 Gene

Pathways & Interactions for ENSG00000260681 Gene

PathCards logo

SuperPathways for ENSG00000260681 Gene

No Data Available

Interacting Proteins for ENSG00000260681 Gene

Gene Ontology (GO) - Biological Process for ENSG00000260681 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000260681 Gene

Drugs & Compounds for ENSG00000260681 Gene

No Compound Related Data Available

Transcripts for ENSG00000260681 Gene

mRNA/cDNA for ENSG00000260681 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260681 Gene

No ASD Table

Relevant External Links for ENSG00000260681 Gene

GeneLoc Exon Structure for
ENSG00000260681

Expression for ENSG00000260681 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000260681 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000260681 Gene

This gene is overexpressed in Minor Salivary Gland (x16.5), Prostate (x6.0), Colon - Transverse (x5.9), Lung (x4.9), and Cervix - Endocervix (x4.7).
genes like me logo Genes that share expression patterns with ENSG00000260681: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260681 Gene

Orthologs for ENSG00000260681 Gene

Evolution for ENSG00000260681 Gene

ENSEMBL:
Gene Tree for ENSG00000260681 (if available)
TreeFam:
Gene Tree for ENSG00000260681 (if available)

No data available for Orthologs for ENSG00000260681 Gene

Paralogs for ENSG00000260681 Gene

No data available for Paralogs for ENSG00000260681 Gene

Variants for ENSG00000260681 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260681 Gene

Disorders for ENSG00000260681 Gene

No disorders were found for ENSG00000260681 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260681 Gene

Publications for ENSG00000260681 Gene

No publications were found for ENSG00000260681 Gene.

No data available for External Links for ENSG00000260681 Gene

Products for ENSG00000260681 Gene

Sources for ENSG00000260681 Gene

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