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Aliases for ENSG00000260647 Gene

Subcategory (RNA class) for ENSG00000260647 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000260647 Gene

  • AC127537.1 5

External Ids for ENSG00000260647 Gene

ORGUL Members for ENSG00000260647 Gene

Previous GeneCards Identifiers for ENSG00000260647 Gene

  • GC17P018171

Summaries for ENSG00000260647 Gene

GeneCards Summary for ENSG00000260647 Gene

ENSG00000260647 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260647 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000260647 Gene

Genomics for ENSG00000260647 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260647 Gene

Promoters and enhancers for ENSG00000260647 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J018267 Enhancer 0.8 Ensembl ENCODE 650.7 +0.4 372 1.2 SP2 ZIC2 ZNF335 SSRP1 ZFHX2 PATZ1 EGR2 ZBTB20 ENSG00000260647 SHMT1 TOP3A RPL21P121 SMCR8 LLGL1 MYO15A DRG2 GC17M018275 PIR58797
GH17J018087 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.7 -179.9 -179864 1.9 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 ZNF548 SP3 DRG2 ENSG00000264885 ZNF286B RAI1 FOXO3B SMCR8 LOC100419436 ENSG00000265511 SMCR5 ACTG1P24
GH17J017493 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10 -772.8 -772773 4.5 ATF1 SIN3A DMAP1 ZNF48 GLIS2 ZNF143 RUNX3 ZNF202 SP3 RXRA RASD1 LOC100419436 DRG2 LOC644422 ENSG00000265511 RAI1 TOP3A SMCR8 ACTG1P24 MPRIP
GH17J017748 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 10 -514.2 -514244 10.3 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZBTB7B YY1 ZNF143 FOS ZNF286B ENSG00000264885 RAI1 USP32P2 LOC100419436 MPRIP-AS1 SMCR5 ENSG00000273018 CCDC144B FOXO3B
GH17J019254 Enhancer 0.9 dbSUPER 11.6 +986.9 986877 1.7 ZNF493 ZFP64 MZF1 ZEB1 ZNF155 ZNF121 ZNF213 ZNF138 ZNF366 KLF7 ENSG00000264885 FOXO3B MAPK7 SMCR8 ENSG00000262202 ENSG00000264932 CCDC144B TVP23B EPN2 ZNF286B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000260647 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260647 Gene

Genomic Locations for ENSG00000260647 Gene
chr17:18,268,080-18,268,828
(GRCh38/hg38)
Size:
749 bases
Orientation:
Plus strand
chr17:18,171,394-18,172,142
(GRCh37/hg19)
Size:
749 bases
Orientation:
Plus strand

Genomic View for ENSG00000260647 Gene

Genes around ENSG00000260647 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260647 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260647 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260647 Gene

Proteins for ENSG00000260647 Gene

Post-translational modifications for ENSG00000260647 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260647 Gene

Domains & Families for ENSG00000260647 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000260647 Gene

Function for ENSG00000260647 Gene

Phenotypes From GWAS Catalog for ENSG00000260647 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260647 Gene

Localization for ENSG00000260647 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260647 Gene

Pathways & Interactions for ENSG00000260647 Gene

SuperPathways for ENSG00000260647 Gene

No Data Available

Interacting Proteins for ENSG00000260647 Gene

Gene Ontology (GO) - Biological Process for ENSG00000260647 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000260647 Gene

Drugs & Compounds for ENSG00000260647 Gene

No Compound Related Data Available

Transcripts for ENSG00000260647 Gene

mRNA/cDNA for ENSG00000260647 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260647 Gene

No ASD Table

Relevant External Links for ENSG00000260647 Gene

GeneLoc Exon Structure for
ENSG00000260647

Expression for ENSG00000260647 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000260647 Gene

genes like me logo Genes that share expression patterns with ENSG00000260647: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260647 Gene

Orthologs for ENSG00000260647 Gene

Evolution for ENSG00000260647 Gene

ENSEMBL:
Gene Tree for ENSG00000260647 (if available)
TreeFam:
Gene Tree for ENSG00000260647 (if available)

No data available for Orthologs for ENSG00000260647 Gene

Paralogs for ENSG00000260647 Gene

No data available for Paralogs for ENSG00000260647 Gene

Variants for ENSG00000260647 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260647 Gene

Disorders for ENSG00000260647 Gene

No disorders were found for ENSG00000260647 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260647 Gene

Publications for ENSG00000260647 Gene

No publications were found for ENSG00000260647 Gene.

Products for ENSG00000260647 Gene

Sources for ENSG00000260647 Gene

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