Aliases for ENSG00000260645 Gene

Subcategory (RNA class) for ENSG00000260645 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000260645 Gene

  • Novel Transcript 5
  • NONHSAG044219 92
  • Lnc-BCKDHB-2 168
  • AL359715.2 5

External Ids for ENSG00000260645 Gene

Previous GeneCards Identifiers for ENSG00000260645 Gene

  • GC06P081176

Summaries for ENSG00000260645 Gene

GeneCards Summary for ENSG00000260645 Gene

ENSG00000260645 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260645 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260645 Gene

Genomics for ENSG00000260645 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260645 Gene

Promoters and enhancers for ENSG00000260645 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J080468 Enhancer 0.7 Ensembl 500.7 +1.6 1642 0.4 NCOR1 ZBTB25 FOXA2 FOXP1 SMAD4 ZGPAT BCL6 HOMEZ RAD21 KDM1A ENSG00000260645 RPSAP72 lnc-ELOVL4-3
GH06J080464 Enhancer 0.2 Ensembl 500.7 -1.9 -1857 0.6 ENSG00000260645 ENSG00000233967
GH06J080133 Enhancer 0.8 Ensembl 63.8 -333.6 -333557 0.4 EP300 CTCF ZSCAN5C ZNF300 ZNF10 ZIC2 ZNF510 REST MYC ZNF662 ENSG00000260645 LCA5 HMGN3 ENSG00000233967 HMGN3-AS1 BCKDHB ENSG00000218418 piR-46847-225 RF00017-5637
GH06J080453 Enhancer 1.2 FANTOM5 Ensembl ENCODE 5.7 -11.2 -11157 5.6 JUND FOS EP300 TRIM22 CTCF BCL11A ZNF316 MAFF REST NR3C1 ENSG00000233967 ENSG00000272129 ENSG00000260645
GH06J080249 Enhancer 0.9 Ensembl 6.2 -216.8 -216757 1.2 PHB2 HES1 TOE1 CTBP1 TAF9B HDAC3 NCOR1 MBD2 NEUROD1 ZNF282 ENSG00000272129 ENSG00000260645 piR-33432-441 piR-46847-226 BCKDHB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260645 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260645 Gene

Genomic Locations for ENSG00000260645 Gene
chr6:80,466,958-80,469,080
(GRCh38/hg38)
Size:
2,123 bases
Orientation:
Plus strand
chr6:81,176,675-81,178,797
(GRCh37/hg19)
Size:
2,123 bases
Orientation:
Plus strand

Genomic View for ENSG00000260645 Gene

Genes around ENSG00000260645 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260645 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260645 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260645 Gene

Proteins for ENSG00000260645 Gene

Post-translational modifications for ENSG00000260645 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260645 Gene

Domains & Families for ENSG00000260645 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260645 Gene

Function for ENSG00000260645 Gene

Phenotypes From GWAS Catalog for ENSG00000260645 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260645 Gene

Localization for ENSG00000260645 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260645 Gene

Pathways & Interactions for ENSG00000260645 Gene

PathCards logo

SuperPathways for ENSG00000260645 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000260645 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260645 Gene

Drugs & Compounds for ENSG00000260645 Gene

No Compound Related Data Available

Transcripts for ENSG00000260645 Gene

mRNA/cDNA for ENSG00000260645 Gene

2 RNACentral transcripts :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260645 Gene

No ASD Table

Relevant External Links for ENSG00000260645 Gene

GeneLoc Exon Structure for
ENSG00000260645

Expression for ENSG00000260645 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260645 Gene

Orthologs for ENSG00000260645 Gene

Evolution for ENSG00000260645 Gene

ENSEMBL:
Gene Tree for ENSG00000260645 (if available)
TreeFam:
Gene Tree for ENSG00000260645 (if available)

No data available for Orthologs for ENSG00000260645 Gene

Paralogs for ENSG00000260645 Gene

No data available for Paralogs for ENSG00000260645 Gene

Variants for ENSG00000260645 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260645 Gene

Disorders for ENSG00000260645 Gene

No disorders were found for ENSG00000260645 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260645 Gene

Publications for ENSG00000260645 Gene

No publications were found for ENSG00000260645 Gene.

No data available for Mastermind for ENSG00000260645 Gene

Products for ENSG00000260645 Gene

Sources for ENSG00000260645 Gene