Aliases for ENSG00000260495 Gene

Data sources for ENSG00000260495 Gene:

Subcategory (RNA class) for ENSG00000260495 Gene

lncRNA

Aliases for ENSG00000260495 Gene

External Ids for ENSG00000260495 Gene

Previous GeneCards Identifiers for ENSG00000260495 Gene

  • GC16M081344
  • GC16M081311

Summaries for ENSG00000260495 Gene

GeneCards Summary for ENSG00000260495 Gene

ENSG00000260495 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260495 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260495 Gene

Genomics for ENSG00000260495 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000260495 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J081312 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 250.7 -0.2 -180 4.1 CHD2 TBP SP1 MXD4 SIX5 NR2C1 MNT BRCA1 SMAD5 ETS1 ENSG00000260495 GAN lnc-GAN-2 piR-61240-114 CMIP
GH16J080568 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE 11.4 +745.1 745077 1.8 BCL11A ZIC2 VEZF1 MAFF ZNF341 RXRA ZNF843 KLF9 ZNF316 FOSL1 LINC01227 DYNLRB2 ENSG00000260495 piR-57133-237 CDYL2
GH16J081841 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 10 -527.3 -527321 1.9 BCL11A POLR2A ZNF623 TRIM22 EBF1 CBFB BHLHE40 BATF EP400 ZNF664 PLCG2 ENSG00000261141 CENPN-AS1 C16orf46 ENSG00000260495 CMIP piR-43106-088 HSALNG0113013 SDR42E1
GH16J081598 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 5.3 -286.0 -286012 4.8 FEZF1 CTCF ZIC2 SAP130 RXRA PRDM1 SIN3A TEAD3 JUND PRDM6 CMC2 ENSG00000260495 GAN MIR6504 MIR7854 PLCG2 CMIP
GH16J081313 Enhancer 0.3 Ensembl 0.7 +2.9 2877 0.6 ZFP3 lnc-GAN-2 lnc-GCSH-4 ENSG00000260495 GAN BCO1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260495 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000260495 Gene

Latest Assembly
chr16:81,292,453-81,314,778
(GRCh38/hg38)
Size:
22,326 bases
Orientation:
Minus strand

Previous Assembly
chr16:81,344,336-81,347,028
(GRCh37/hg19 by Ensembl)
Size:
2,693 bases
Orientation:
Minus strand

Genomic View for ENSG00000260495 Gene

Genes around ENSG00000260495 on UCSC Golden Path with GeneCards custom track
ENSG00000260495 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000260495 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260495 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260495 Gene

Proteins for ENSG00000260495 Gene

Post-translational modifications for ENSG00000260495 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260495 Gene

Domains & Families for ENSG00000260495 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260495 Gene

Function for ENSG00000260495 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260495 Gene

Localization for ENSG00000260495 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260495 Gene

Pathways & Interactions for ENSG00000260495 Gene

PathCards logo

SuperPathways for ENSG00000260495 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000260495 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260495 Gene

Drugs & Compounds for ENSG00000260495 Gene

No Compound Related Data Available

Transcripts for ENSG00000260495 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000260495 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005B3289_9606 lncRNA 2694 4

Ensembl: ENST00000570148 (view in UCSC) ,

LncBook: HSALNT0234244,

LNCipedia: lnc-GCSH-1:1,

NONCODE: NONHSAT143941.2,

URS00008BE463_9606 lncRNA 3268 2

LNCipedia: lnc-GCSH-1:2,

NONCODE: NONHSAT143942.2,

URS0000D57941_9606 lncRNA 22325 1

LNCipedia: lnc-GCSH-4:1,

URS0000D5A95B_9606 lncRNA 5034 1

LNCipedia: lnc-GCSH-4:2,

URS0001BF8435_9606 lncRNA 2693 1

LncBook: HSALNT0234244,

ENSG00000260495 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260495 Gene

No ASD Table

Relevant External Links for ENSG00000260495 Gene

GeneLoc Exon Structure for
ENSG00000260495

No data available for mRNA/cDNA for ENSG00000260495 Gene

Expression for ENSG00000260495 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260495 Gene

genes like me logo Genes that share expression patterns with ENSG00000260495: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260495 Gene

Orthologs for ENSG00000260495 Gene

Evolution for ENSG00000260495 Gene

ENSEMBL:
Gene Tree for ENSG00000260495 (if available)
TreeFam:
Gene Tree for ENSG00000260495 (if available)

No data available for Orthologs for ENSG00000260495 Gene

Paralogs for ENSG00000260495 Gene

No data available for Paralogs for ENSG00000260495 Gene

Variants for ENSG00000260495 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260495 Gene

Disorders for ENSG00000260495 Gene

No disorders were found for ENSG00000260495 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260495 Gene

Publications for ENSG00000260495 Gene

No publications were found for ENSG00000260495 Gene.

No data available for Mastermind for ENSG00000260495 Gene

Products for ENSG00000260495 Gene

Sources for ENSG00000260495 Gene