Aliases for ENSG00000260495 Gene

Subcategory (RNA class) for ENSG00000260495 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000260495 Gene

  • Novel Transcript, Antisense To GAN 5
  • NONHSAG020097 92
  • HSALNG0112986 167
  • AC009148.1 5
  • Lnc-GCSH-4 168
  • Lnc-GCSH-1 168

External Ids for ENSG00000260495 Gene

Previous GeneCards Identifiers for ENSG00000260495 Gene

  • GC16M081344

Summaries for ENSG00000260495 Gene

GeneCards Summary for ENSG00000260495 Gene

ENSG00000260495 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260495 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260495 Gene

Genomics for ENSG00000260495 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260495 Gene

Promoters and enhancers for ENSG00000260495 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J081312 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 500.7 -1.5 -1535 4.1 FOXK2 ZBTB40 ZNF217 EP300 SIN3A TCF12 NRF1 MYC USF1 POLR2G ENSG00000260495 GAN lnc-GAN-2
GH16J081311 Enhancer 0.3 Ensembl 500.7 +1.8 1823 0.8 ZFP3 ENSG00000260495 lnc-GAN-2 lnc-GCSH-4
GH16J081841 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 10 -528.7 -528676 1.9 EP300 ZNF623 TRIM22 CTCF BCL11A TCF12 CBFB ARNT MEF2B NBN PLCG2 ENSG00000261141 ENSG00000260213 C16orf46 ENSG00000260495 CMIP piR-43106-088
GH16J080568 Enhancer 1 Ensembl ENCODE 11.4 +743.7 743722 1.8 ZIC2 TRIM28 MEF2C ZNF341 BCL11A KLF9 ZNF316 ZBTB17 MAFF ZNF184 DYNLRB2 ENSG00000260495 LINC01227 piR-57133-237
GH16J081598 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 5.3 -287.8 -287778 5.6 CTCF JUND ZIC2 RFX1 TEAD1 ATF2 RBM25 SIN3A KDM1A CREB1 CMC2 ENSG00000260495 GAN MIR6504 MIR7854 CMIP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260495 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260495 Gene

Genomic Locations for ENSG00000260495 Gene
chr16:81,310,731-81,313,423
(GRCh38/hg38)
Size:
2,693 bases
Orientation:
Minus strand
chr16:81,344,336-81,347,028
(GRCh37/hg19)
Size:
2,693 bases
Orientation:
Minus strand

Genomic View for ENSG00000260495 Gene

Genes around ENSG00000260495 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260495 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260495 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260495 Gene

Proteins for ENSG00000260495 Gene

Post-translational modifications for ENSG00000260495 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260495 Gene

Domains & Families for ENSG00000260495 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260495 Gene

Function for ENSG00000260495 Gene

Phenotypes From GWAS Catalog for ENSG00000260495 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260495 Gene

Localization for ENSG00000260495 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260495 Gene

Pathways & Interactions for ENSG00000260495 Gene

PathCards logo

SuperPathways for ENSG00000260495 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000260495 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260495 Gene

Drugs & Compounds for ENSG00000260495 Gene

No Compound Related Data Available

Transcripts for ENSG00000260495 Gene

mRNA/cDNA for ENSG00000260495 Gene

4 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
1 LncBook transcripts :
4 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260495 Gene

No ASD Table

Relevant External Links for ENSG00000260495 Gene

GeneLoc Exon Structure for
ENSG00000260495

Expression for ENSG00000260495 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260495 Gene

genes like me logo Genes that share expression patterns with ENSG00000260495: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260495 Gene

Orthologs for ENSG00000260495 Gene

Evolution for ENSG00000260495 Gene

ENSEMBL:
Gene Tree for ENSG00000260495 (if available)
TreeFam:
Gene Tree for ENSG00000260495 (if available)

No data available for Orthologs for ENSG00000260495 Gene

Paralogs for ENSG00000260495 Gene

No data available for Paralogs for ENSG00000260495 Gene

Variants for ENSG00000260495 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260495 Gene

Disorders for ENSG00000260495 Gene

No disorders were found for ENSG00000260495 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260495 Gene

Publications for ENSG00000260495 Gene

No publications were found for ENSG00000260495 Gene.

No data available for Mastermind for ENSG00000260495 Gene

Products for ENSG00000260495 Gene

Sources for ENSG00000260495 Gene