Aliases for ENSG00000260467 Gene

Subcategory (RNA class) for ENSG00000260467 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000260467 Gene

  • Novel Transcript, Antisense To CCDC135 And GPR97 5
  • HSALNG0111793 169
  • NONHSAG019578 94
  • Lnc-KIFC3-1 170
  • AC018552.2 5

External Ids for ENSG00000260467 Gene

Previous GeneCards Identifiers for ENSG00000260467 Gene

  • GC16M057715

Summaries for ENSG00000260467 Gene

GeneCards Summary for ENSG00000260467 Gene

ENSG00000260467 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260467 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260467 Gene

Genomics for ENSG00000260467 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260467 Gene

Promoters and enhancers for ENSG00000260467 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J057700 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 +0.7 729 2.4 NR2F1 NR2F6 TEAD4 RERE ELF3 AHR CBFA2T2 SMARCA4 PPARG ZNF639 ENSG00000260467 DRC7 KATNB1 ADGRG3 ADGRG1
GH16J057704 Enhancer 0.3 Ensembl 750.6 -1.8 -1771 0.2 KAT7 ZNF205 ENSG00000260467 KATNB1 ADGRG3 ADGRG1 DRC7 LOC100421594 lnc-KATNB1-1
GH16J057688 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas dbSUPER 12.1 +12.1 12053 2.1 SP1 SMARCE1 NR2F1 NR2F6 RUNX1 MYC CC2D1A ELF1 RELA L3MBTL2 DRC7 RSPRY1 CNOT1 CCDC102A ENSG00000261302 CFAP20 ENSG00000260467 ENSG00000260927 ENSG00000261270 NLRC5
GH16J057691 Enhancer 1 ENCODE dbSUPER 14.6 +10.4 10446 0.2 SMARCE1 RUNX1 CC2D1A TEAD4 ZNF148 CBFA2T2 MLLT1 SMARCA4 MTA1 IKZF1 ENSG00000260467 DRC7 ADGRG3
GH16J057693 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE dbSUPER 7.2 +6.8 6846 1.9 GTF3C2 ZBTB40 SIX5 FOXA1 RBPJ SMARCE1 CREB1 HCFC1 ZNF362 CC2D1A DRC7 CNOT1 RSPRY1 ENSG00000260927 SETD6 NUP93 CSNK2A2 ENSG00000260467
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260467 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260467 Gene

Genomic Locations for ENSG00000260467 Gene
chr16:57,681,124-57,701,730
(GRCh38/hg38)
Size:
20,607 bases
Orientation:
Minus strand
chr16:57,715,036-57,735,642
(GRCh37/hg19)
Size:
20,607 bases
Orientation:
Minus strand

Genomic View for ENSG00000260467 Gene

Genes around ENSG00000260467 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260467 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260467 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260467 Gene

Proteins for ENSG00000260467 Gene

Post-translational modifications for ENSG00000260467 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260467 Gene

Domains & Families for ENSG00000260467 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260467 Gene

Function for ENSG00000260467 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260467 Gene

Localization for ENSG00000260467 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260467 Gene

Pathways & Interactions for ENSG00000260467 Gene

PathCards logo

SuperPathways for ENSG00000260467 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000260467 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000260467 Gene

Drugs & Compounds for ENSG00000260467 Gene

No Compound Related Data Available

Transcripts for ENSG00000260467 Gene

mRNA/cDNA for ENSG00000260467 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(1) LncBook transcripts :
(1) NONCODE transcripts :
(2) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260467 Gene

No ASD Table

Relevant External Links for ENSG00000260467 Gene

GeneLoc Exon Structure for
ENSG00000260467

Expression for ENSG00000260467 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000260467 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000260467 Gene

This gene is overexpressed in Whole Blood (x42.6).
genes like me logo Genes that share expression patterns with ENSG00000260467: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260467 Gene

Orthologs for ENSG00000260467 Gene

Evolution for ENSG00000260467 Gene

ENSEMBL:
Gene Tree for ENSG00000260467 (if available)
TreeFam:
Gene Tree for ENSG00000260467 (if available)

No data available for Orthologs for ENSG00000260467 Gene

Paralogs for ENSG00000260467 Gene

No data available for Paralogs for ENSG00000260467 Gene

Variants for ENSG00000260467 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260467 Gene

Disorders for ENSG00000260467 Gene

No disorders were found for ENSG00000260467 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260467 Gene

Publications for ENSG00000260467 Gene

No publications were found for ENSG00000260467 Gene.

No data available for External Links for ENSG00000260467 Gene

Products for ENSG00000260467 Gene

Sources for ENSG00000260467 Gene