Aliases for ENSG00000260430 Gene

Subcategory (RNA class) for ENSG00000260430 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000260430 Gene

  • Novel Transcript 5
  • Lnc-ITPRIPL2-2 168
  • HSALNG0109982 167
  • NONHSAG018777 92
  • AC099518.1 5

External Ids for ENSG00000260430 Gene

Summaries for ENSG00000260430 Gene

GeneCards Summary for ENSG00000260430 Gene

ENSG00000260430 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260430 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260430 Gene

Genomics for ENSG00000260430 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260430 Gene

Promoters and enhancers for ENSG00000260430 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J019085 Promoter/Enhancer 1.9 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 -0.1 -141 1.8 EP300 ZNF217 CTCF NRF1 TCF12 USF1 POLR2G PHF8 ZNF639 ZIC2 ENSG00000260430 COQ7 lnc-TMC7-5
GH16J019093 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +8.2 8220 3.3 FOXK2 CTCF POLR2G EP300 ZBTB25 MYC TGIF2 TEAD1 ZBTB26 NFYB COQ7 SYT17 RNU4-46P ENSG00000260430 ENSG00000278389
GH16J019091 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +5.5 5533 1.9 FOXK2 ZSCAN5C NONO FOXA1 EP300 U2AF2 GATAD2B RAD51 ZNF282 CTCF COQ7 ENSG00000260430 ENSG00000278389
GH16J019107 Enhancer 1.1 ENCODE dbSUPER 0.4 +21.4 21380 1.8 EP300 FOXK2 POLR2G NCOR1 JUND FOS ZNF639 KDM6A ZBTB25 TGIF2 SYT17 COQ7 RNU4-46P ENSG00000278389 ENSG00000260430
GH16J019102 Enhancer 0.8 Ensembl 0.4 +15.6 15570 0.4 ZSCAN5C ZNF639 ZNF10 ZIC2 ATF2 OSR2 BCL11A WT1 CREB1 SP2 COQ7 SYT17 RNU4-46P ENSG00000278389 ENSG00000260430
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260430 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260430 Gene

Genomic Locations for ENSG00000260430 Gene
chr16:19,086,831-19,098,332
(GRCh38/hg38)
Size:
11,502 bases
Orientation:
Plus strand
chr16:19,098,178-19,109,432
(GRCh37/hg19)
Size:
11,255 bases
Orientation:
Plus strand

Genomic View for ENSG00000260430 Gene

Genes around ENSG00000260430 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260430 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260430 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260430 Gene

Proteins for ENSG00000260430 Gene

Post-translational modifications for ENSG00000260430 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260430 Gene

Domains & Families for ENSG00000260430 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260430 Gene

Function for ENSG00000260430 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260430 Gene

Localization for ENSG00000260430 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260430 Gene

Pathways & Interactions for ENSG00000260430 Gene

PathCards logo

SuperPathways for ENSG00000260430 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000260430 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260430 Gene

Drugs & Compounds for ENSG00000260430 Gene

No Compound Related Data Available

Transcripts for ENSG00000260430 Gene

mRNA/cDNA for ENSG00000260430 Gene

9 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
5 LncBook transcripts :
6 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260430 Gene

No ASD Table

Relevant External Links for ENSG00000260430 Gene

GeneLoc Exon Structure for
ENSG00000260430

Expression for ENSG00000260430 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260430 Gene

genes like me logo Genes that share expression patterns with ENSG00000260430: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260430 Gene

Orthologs for ENSG00000260430 Gene

Evolution for ENSG00000260430 Gene

ENSEMBL:
Gene Tree for ENSG00000260430 (if available)
TreeFam:
Gene Tree for ENSG00000260430 (if available)

No data available for Orthologs for ENSG00000260430 Gene

Paralogs for ENSG00000260430 Gene

No data available for Paralogs for ENSG00000260430 Gene

Variants for ENSG00000260430 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260430 Gene

Disorders for ENSG00000260430 Gene

No disorders were found for ENSG00000260430 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260430 Gene

Publications for ENSG00000260430 Gene

No publications were found for ENSG00000260430 Gene.

No data available for Mastermind for ENSG00000260430 Gene

Products for ENSG00000260430 Gene

Sources for ENSG00000260430 Gene