Aliases for ENSG00000260401 Gene

Subcategory (RNA class) for ENSG00000260401 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000260401 Gene

  • Novel Transcript, Overlapping To P2RY2 5
  • NONHSAG009013 92
  • Lnc-P2RY2-1 168
  • AP002761.4 5

External Ids for ENSG00000260401 Gene

Previous GeneCards Identifiers for ENSG00000260401 Gene

  • GC11P072950

Summaries for ENSG00000260401 Gene

GeneCards Summary for ENSG00000260401 Gene

ENSG00000260401 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260401 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260401 Gene

Genomics for ENSG00000260401 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260401 Gene

Promoters and enhancers for ENSG00000260401 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J073236 Enhancer 1.2 Ensembl ENCODE dbSUPER 500.7 -1.4 -1374 2.8 EP300 CTCF USF1 FOS KDM6A GABPA REST ZBTB25 RAD21 ZBTB7A ENSG00000260401 P2RY6 P2RY2
GH11J073239 Enhancer 0.9 Ensembl ENCODE dbSUPER 500.7 +1.4 1426 2 SREBF2 RBM25 POLR2A CEBPB NR2F2 ZFHX2 USF2 BHLHE40 AFF1 ZFP36 ENSG00000260401 P2RY6 ENSG00000215841 P2RY2 ARAP1 ARAP1-AS1 lnc-P2RY2-11
GH11J073192 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 5.8 -44.5 -44472 4.7 ZNF217 TCF12 JUND FOS EP300 CLOCK KLF4 CUX1 CHD1 GATAD2B ENSG00000215841 P2RY2 ARHGEF17 RELT ENSG00000260401 RF00017-978 HSALNG0085612
GH11J073184 Enhancer 1 ENCODE dbSUPER 6.7 -52.8 -52825 2.3 ZNF217 CTCF TCF12 FOS REST RAD21 EP300 CTBP1 TRIM22 SMC3 HSALNG0085612 ENSG00000260401 RF00017-978
GH11J073197 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 5.8 -40.6 -40603 1.8 USF1 JUND FOS TEAD4 RFX1 EP300 JUN TEAD1 DEK FOSL1 RF00017-978 lnc-P2RY2-2 RELT ENSG00000260401 P2RY2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260401 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260401 Gene

Genomic Locations for ENSG00000260401 Gene
chr11:73,238,975-73,242,335
(GRCh38/hg38)
Size:
3,361 bases
Orientation:
Plus strand
chr11:72,950,020-72,953,380
(GRCh37/hg19)
Size:
3,361 bases
Orientation:
Plus strand

Genomic View for ENSG00000260401 Gene

Genes around ENSG00000260401 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260401 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260401 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260401 Gene

Proteins for ENSG00000260401 Gene

Post-translational modifications for ENSG00000260401 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260401 Gene

Domains & Families for ENSG00000260401 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260401 Gene

Function for ENSG00000260401 Gene

Phenotypes From GWAS Catalog for ENSG00000260401 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260401 Gene

Localization for ENSG00000260401 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260401 Gene

Pathways & Interactions for ENSG00000260401 Gene

PathCards logo

SuperPathways for ENSG00000260401 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000260401 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260401 Gene

Drugs & Compounds for ENSG00000260401 Gene

No Compound Related Data Available

Transcripts for ENSG00000260401 Gene

mRNA/cDNA for ENSG00000260401 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260401 Gene

No ASD Table

Relevant External Links for ENSG00000260401 Gene

GeneLoc Exon Structure for
ENSG00000260401

Expression for ENSG00000260401 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260401 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000260401 Gene

This gene is overexpressed in Esophagus - Mucosa (x9.4), Muscle - Skeletal (x8.1), and Thyroid (x4.0).
genes like me logo Genes that share expression patterns with ENSG00000260401: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260401 Gene

Orthologs for ENSG00000260401 Gene

Evolution for ENSG00000260401 Gene

ENSEMBL:
Gene Tree for ENSG00000260401 (if available)
TreeFam:
Gene Tree for ENSG00000260401 (if available)

No data available for Orthologs for ENSG00000260401 Gene

Paralogs for ENSG00000260401 Gene

No data available for Paralogs for ENSG00000260401 Gene

Variants for ENSG00000260401 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260401 Gene

Disorders for ENSG00000260401 Gene

No disorders were found for ENSG00000260401 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260401 Gene

Publications for ENSG00000260401 Gene

No publications were found for ENSG00000260401 Gene.

No data available for Mastermind for ENSG00000260401 Gene

Products for ENSG00000260401 Gene

Sources for ENSG00000260401 Gene