Aliases for ENSG00000260381 Gene

Subcategory (RNA class) for ENSG00000260381 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000260381 Gene

  • Novel Transcript, Antisense To HEATR3 5
  • NONHSAG019408 92
  • AC007610.2 5
  • Lnc-BRD7-3 168

External Ids for ENSG00000260381 Gene

Previous GeneCards Identifiers for ENSG00000260381 Gene

  • GC16M050135

Summaries for ENSG00000260381 Gene

GeneCards Summary for ENSG00000260381 Gene

ENSG00000260381 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260381 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260381 Gene

Genomics for ENSG00000260381 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260381 Gene

Promoters and enhancers for ENSG00000260381 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J050120 Enhancer 0.9 Ensembl ENCODE 500.7 +0.5 464 2.2 RXRA SP1 RELA RBM25 BCL11A TCF12 FOXA2 CBFB ARNT MEF2B ENSG00000260381 ENSG00000287444 HEATR3 ENSG00000252526 TENT4B BRD7
GH16J050312 Enhancer 1.2 Ensembl ENCODE dbSUPER 5 -192.5 -192541 4.8 TCF7 SKI TEAD1 MXI1 POLR2A FOXA2 TFDP1 SAP130 POLR2G MBD1 BRD7 TENT4B ENSG00000252526 ENSG00000260381 lnc-ADCY7-3 piR-48553-128 ADCY7
GH16J050099 Enhancer 0.7 Ensembl ENCODE 0.4 +20.0 19973 5.1 JUND FOS BATF ATF2 JUNB CEBPB BHLHE40 NFIC CREM ZNF121 HEATR3 ENSG00000252526 TENT4B CNEP1R1 RNY4P3 RF00019-054 lnc-PAPD5-1 ENSG00000260381
GH16J050110 Enhancer 0.4 Ensembl ENCODE 0.4 +11.2 11173 0.5 ZNF121 BRD7 ENSG00000287444 lnc-PAPD5-1 ENSG00000260381
GH16J050114 Enhancer 0.4 Ensembl 0.4 +7.1 7142 1.2 ZFHX2 PKNOX1 EGR2 HEATR3 BRD7 ENSG00000260381 ENSG00000287444 lnc-PAPD5-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260381 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260381 Gene

Genomic Locations for ENSG00000260381 Gene
chr16:50,100,339-50,121,943
(GRCh38/hg38)
Size:
21,605 bases
Orientation:
Minus strand
chr16:50,134,250-50,155,854
(GRCh37/hg19)
Size:
21,605 bases
Orientation:
Minus strand

Genomic View for ENSG00000260381 Gene

Genes around ENSG00000260381 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260381 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260381 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260381 Gene

Proteins for ENSG00000260381 Gene

Post-translational modifications for ENSG00000260381 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260381 Gene

Domains & Families for ENSG00000260381 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260381 Gene

Function for ENSG00000260381 Gene

Phenotypes From GWAS Catalog for ENSG00000260381 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260381 Gene

Localization for ENSG00000260381 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260381 Gene

Pathways & Interactions for ENSG00000260381 Gene

PathCards logo

SuperPathways for ENSG00000260381 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000260381 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260381 Gene

Drugs & Compounds for ENSG00000260381 Gene

No Compound Related Data Available

Transcripts for ENSG00000260381 Gene

mRNA/cDNA for ENSG00000260381 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260381 Gene

No ASD Table

Relevant External Links for ENSG00000260381 Gene

GeneLoc Exon Structure for
ENSG00000260381

Expression for ENSG00000260381 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260381 Gene

Orthologs for ENSG00000260381 Gene

Evolution for ENSG00000260381 Gene

ENSEMBL:
Gene Tree for ENSG00000260381 (if available)
TreeFam:
Gene Tree for ENSG00000260381 (if available)

No data available for Orthologs for ENSG00000260381 Gene

Paralogs for ENSG00000260381 Gene

No data available for Paralogs for ENSG00000260381 Gene

Variants for ENSG00000260381 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260381 Gene

Disorders for ENSG00000260381 Gene

No disorders were found for ENSG00000260381 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260381 Gene

Publications for ENSG00000260381 Gene

No publications were found for ENSG00000260381 Gene.

No data available for Mastermind for ENSG00000260381 Gene

Products for ENSG00000260381 Gene

Sources for ENSG00000260381 Gene