ENSG00000260360 Gene (RNA Gene)

 

GC01M181069
GIFtS:
6

Aliases for ENSG00000260360 Gene

Subcategory (RNA class) for ENSG00000260360 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000260360 Gene

  • Novel Transcript 5
  • Lnc-TOR1AIP2-4 170
  • HSALNG0008788 169
  • NONHSAG003615 94
  • AL353708.1 5

External Ids for ENSG00000260360 Gene

Previous GeneCards Identifiers for ENSG00000260360 Gene

  • GC01M179922
  • GC01M180072
  • GC01M180104
  • GC01M180962
  • GC01M181053
  • GC01M180226
  • GC01M180322
  • GC01M180422
  • GC01M180517
  • GC01M180605
  • GC01M180703
  • GC01M180793
  • GC01M180887

Summaries for ENSG00000260360 Gene

GeneCards Summary for ENSG00000260360 Gene

ENSG00000260360 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260360 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260360 Gene

Genomics for ENSG00000260360 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260360 Gene

Promoters and enhancers for ENSG00000260360 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J179951 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 750.6 -0.4 -356 6 ZNF785 SP1 ZBTB40 CTCF SIX5 FOXA1 RBPJ SMARCE1 POLR2A ATF1 CEP350 ENSG00000260360 LOC101928933 piR-51619 LHX4 QSOX1 ACBD6 ENSG00000261831 RPSAP16
GH01J180150 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 4.2 -200.4 -200407 8.8 ZNF24 SP1 ZBTB40 GATA3 LCORL FOXA1 RBPJ SMARCE1 POLR2A NR2F6 QSOX1 LOC105371636 lnc-ACBD6-3 CEP350 LHX4 TOR1AIP1 ENSG00000261831 AXDND1 ENSG00000260360 piR-34309
GH01J180130 Enhancer 1.2 Ensembl ENCODE dbSUPER 4.5 -174.9 -174861 8.6 ZBTB6 NR2F1 MYC MAX ZNF121 TEAD4 ZNF652 SP1 CBFA2T2 CEBPG QSOX1 ENSG00000261831 LHX4 ENSG00000260360 lnc-CEP350-1 ENSG00000261817 lnc-ACBD6-3
GH01J180136 Enhancer 0.4 Ensembl 4.7 -182.3 -182261 1.4 SCRT2 SCRT1 JUN ENSG00000260360 RF00017-413 lnc-CEP350-1 lnc-ACBD6-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260360 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260360 Gene

Genomic Locations for ENSG00000260360 Gene
chr1:179,953,184-179,954,440
(GRCh38/hg38)
Size:
1,257 bases
Orientation:
Minus strand
chr1:179,922,319-179,923,575
(GRCh37/hg19)
Size:
1,257 bases
Orientation:
Minus strand

Genomic View for ENSG00000260360 Gene

Genes around ENSG00000260360 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260360 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260360 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000260360 Gene

Proteins for ENSG00000260360 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000260360 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260360 Gene

Domains & Families for ENSG00000260360 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260360 Gene

Function for ENSG00000260360 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ENSG00000260360 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260360 Gene

Localization for ENSG00000260360 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260360 Gene

Pathways & Interactions for ENSG00000260360 Gene

PathCards logo

SuperPathways for ENSG00000260360 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000260360 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000260360 Gene

Drugs & Compounds for ENSG00000260360 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000260360 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000260360 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNACentral transcripts :
(1) NONCODE transcripts :
(3) LNCipedia transcripts :
(1) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260360 Gene

No ASD Table

Relevant External Links for ENSG00000260360 Gene

GeneLoc Exon Structure for
ENSG00000260360

Expression for ENSG00000260360 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000260360 Gene

mRNA expression in normal human tissues for ENSG00000260360 Gene
mRNA expression by GTEx for ENSG00000260360 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000260360 Gene

This gene is overexpressed in Testis (x10.3).
genes like me logo Genes that share expression patterns with ENSG00000260360: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260360 Gene

Orthologs for ENSG00000260360 Gene

Evolution for ENSG00000260360 Gene

ENSEMBL:
Gene Tree for ENSG00000260360 (if available)
TreeFam:
Gene Tree for ENSG00000260360 (if available)

No data available for Orthologs for ENSG00000260360 Gene

Paralogs for ENSG00000260360 Gene

No data available for Paralogs for ENSG00000260360 Gene

Variants for ENSG00000260360 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260360 Gene

Disorders for ENSG00000260360 Gene

No disorders were found for ENSG00000260360 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260360 Gene

Publications for ENSG00000260360 Gene

No publications were found for ENSG00000260360 Gene.

No data available for External Links for ENSG00000260360 Gene

Products for ENSG00000260360 Gene

Sources for ENSG00000260360 Gene