Aliases for ENSG00000260342 Gene

Aliases for ENSG00000260342 Gene

  • Uncharacterized Protein 13
  • Novel Protein 5
  • AC138811.2 5

External Ids for ENSG00000260342 Gene

Previous GeneCards Identifiers for ENSG00000260342 Gene

  • GC16M018799

Summaries for ENSG00000260342 Gene

GeneCards Summary for ENSG00000260342 Gene

ENSG00000260342 is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include structural constituent of ribosome. An important paralog of this gene is ARL6IP1.

Additional gene information for ENSG00000260342 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260342 Gene

Genomics for ENSG00000260342 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260342 Gene

Promoters and enhancers for ENSG00000260342 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J018797 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 -0.8 -802 9.7 ZNF785 SIN3A ZBTB40 SP1 CTCF ZBTB6 FOXA1 MLX SMARCE1 RBPJ ENSG00000260017 ARL6IP1 ENSG00000260342 L13304-013 L13715-011 lnc-SMG1-1 lnc-TMC7-2 NPIPA9 ENSG00000205746 NPIPA8
GH16J018785 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +13.1 13079 6.1 ZBTB40 SP1 MLX RBPJ POLR2A NR2F1 NR2F6 ATF1 CREB1 HCFC1 RPS15A lnc-ARL6IP1-1 lnc-ARL6IP1-2 ARL6IP1 ITPRIPL2 COQ7 ENSG00000205746 ENSG00000260342 L13304-013 L13715-011
GH16J018796 Enhancer 0.3 ENCODE 0.6 +4.9 4905 0.2 SP1 REST ARL6IP1 ENSG00000260342 lnc-SMG1-1 RPS15A L13304-013 L13715-011
GH16J018793 Enhancer 0.4 ENCODE 0.4 +8.3 8265 0.2 MLLT1 ZNF687 ZBTB33 NR2F1 COQ7 RPS15A ARL6IP1 ENSG00000260342 L13304-013 L13715-011
GH16J018794 Promoter 0.3 EPDnew 0.4 +6.9 6862 0.1 RPS15A COQ7 ARL6IP1 ENSG00000260342 L13304-013 L13715-011
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260342 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260342 Gene

Genomic Locations for ENSG00000260342 Gene
chr16:18,788,063-18,801,519
(GRCh38/hg38)
Size:
13,457 bases
Orientation:
Minus strand
chr16:18,799,385-18,812,841
(GRCh37/hg19)
Size:
13,457 bases
Orientation:
Minus strand

Genomic View for ENSG00000260342 Gene

Genes around ENSG00000260342 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260342 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260342 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260342 Gene

Proteins for ENSG00000260342 Gene

  • Protein details for ENSG00000260342 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    H3BN98-H3BN98_HUMAN
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    H3BN98

    Protein attributes for ENSG00000260342 Gene

    Size:
    237 amino acids
    Molecular mass:
    27168 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000260342 Gene

Post-translational modifications for ENSG00000260342 Gene

No Post-translational modifications

Other Protein References for ENSG00000260342 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ENSG00000260342 Gene

Domains & Families for ENSG00000260342 Gene

Protein Domains for ENSG00000260342 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with ENSG00000260342: view

No data available for Gene Families , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260342 Gene

Function for ENSG00000260342 Gene

Phenotypes From GWAS Catalog for ENSG00000260342 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260342 Gene

Localization for ENSG00000260342 Gene

Subcellular locations from the

Human Protein Atlas (HPA)
  • Endoplasmic reticulum (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for ENSG00000260342 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005784 Sec61 translocon complex IBA --
GO:0005840 ribosome IEA --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IBA --
genes like me logo Genes that share ontologies with ENSG00000260342: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for ENSG00000260342 Gene

Pathways & Interactions for ENSG00000260342 Gene

PathCards logo

SuperPathways for ENSG00000260342 Gene

No Data Available

Interacting Proteins for ENSG00000260342 Gene

STRING Interaction Network Preview (showing top 5 STRING interactants - click image to see top 25)
STRING Interaction Network
Selected Interacting proteins: ENSP00000454746 for ENSG00000260342 Gene via STRING

Gene Ontology (GO) - Biological Process for ENSG00000260342 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006412 translation IEA --
GO:0006613 cotranslational protein targeting to membrane IBA --
genes like me logo Genes that share ontologies with ENSG00000260342: view

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000260342 Gene

Drugs & Compounds for ENSG00000260342 Gene

No Compound Related Data Available

Transcripts for ENSG00000260342 Gene

mRNA/cDNA for ENSG00000260342 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260342 Gene

No ASD Table

Relevant External Links for ENSG00000260342 Gene

GeneLoc Exon Structure for
ENSG00000260342

Expression for ENSG00000260342 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260342 Gene

Orthologs for ENSG00000260342 Gene

This gene was present in the common ancestor of animals.

Orthologs for ENSG00000260342 Gene

Organism Taxonomy Gene Similarity Type Details
dog
(Canis familiaris)
Mammalia RPS15A 33
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia -- 33
  • 94 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 33
  • 78 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 33
  • 75 (a)
OneToOne
chicken
(Gallus gallus)
Aves ARL6IP1 33
  • 73 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 33
  • 73 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii arl6ip1 33
  • 64 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta CG10326 33
  • 25 (a)
OneToMany
Species where no ortholog for ENSG00000260342 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ENSG00000260342 Gene

ENSEMBL:
Gene Tree for ENSG00000260342 (if available)
TreeFam:
Gene Tree for ENSG00000260342 (if available)

Paralogs for ENSG00000260342 Gene

Paralogs for ENSG00000260342 Gene

genes like me logo Genes that share paralogs with ENSG00000260342: view

Variants for ENSG00000260342 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260342 Gene

Disorders for ENSG00000260342 Gene

No disorders were found for ENSG00000260342 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260342 Gene

Publications for ENSG00000260342 Gene

  1. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J … Pennacchio LA (Nature 2004) 13 56

No data available for External Links for ENSG00000260342 Gene

Products for ENSG00000260342 Gene

Sources for ENSG00000260342 Gene