Aliases for ENSG00000260329 Gene

Subcategory (RNA class) for ENSG00000260329 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000260329 Gene

  • Novel Transcript, Antisense To C12orf23 5
  • HSALNG0093754 167
  • NONHSAG012182 92
  • Lnc-MTERF2-1 168
  • AC007541.1 5

External Ids for ENSG00000260329 Gene

Previous GeneCards Identifiers for ENSG00000260329 Gene

  • GC12M107347

Summaries for ENSG00000260329 Gene

GeneCards Summary for ENSG00000260329 Gene

ENSG00000260329 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260329 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260329 Gene

Genomics for ENSG00000260329 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260329 Gene

Promoters and enhancers for ENSG00000260329 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J106954 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 526.4 -1.1 -1106 5.2 HNRNPK NRF1 POLR2G USF1 GTF2E2 PHF8 TEAD4 ZFX CTCF ZNF10 ENSG00000260329 TMEM263 MTERF2 HSALNG0093756
GH12J106953 Enhancer 0.5 ENCODE 500.7 +1.7 1719 0.2 ZIC2 RBM25 WT1 JUND HIC1 ADNP PRDM6 ILF3 FOS ZNF121 ENSG00000260329 TMEM263
GH12J106073 Promoter/Enhancer 1.8 Ensembl ENCODE CraniofacialAtlas dbSUPER 21.2 +875.8 875799 12.6 ZSCAN5C TCF12 JUND FOS TEAD4 ZNF639 ZNF354C EP300 ZIC2 ZBTB10 MTERF2 ENSG00000260329 ENSG00000257545 RIC8B ENSG00000257890 CKAP4 RF00017-1241 NUAK1
GH12J106299 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.7 +653.1 653140 5.7 EP300 FOXK2 ZNF217 SIN3A TCF12 POLR2G SP1 BCLAF1 NONO PHF8 TCP11L2 CKAP4 NONHSAG012173.2 lnc-NUAK1-7 ENSG00000260329 POLR3B MTERF2 TMEM263
GH12J106984 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 9.2 -31.0 -31031 3.3 ZBTB40 ZNF217 SIN3A NRF1 TCF12 USF1 POLR2G SP1 PHF8 ZFX MTERF2 lnc-CRY1-1 PWP1 PRDM4 ENSG00000260329 CRY1 HSALNG0093756
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260329 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260329 Gene

Genomic Locations for ENSG00000260329 Gene
chr12:106,954,029-106,955,497
(GRCh38/hg38)
Size:
1,469 bases
Orientation:
Minus strand

Genomic View for ENSG00000260329 Gene

Genes around ENSG00000260329 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260329 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260329 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260329 Gene

Proteins for ENSG00000260329 Gene

Post-translational modifications for ENSG00000260329 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260329 Gene

Domains & Families for ENSG00000260329 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260329 Gene

Function for ENSG00000260329 Gene

Phenotypes From GWAS Catalog for ENSG00000260329 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260329 Gene

Localization for ENSG00000260329 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260329 Gene

Pathways & Interactions for ENSG00000260329 Gene

PathCards logo

SuperPathways for ENSG00000260329 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000260329 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260329 Gene

Drugs & Compounds for ENSG00000260329 Gene

No Compound Related Data Available

Transcripts for ENSG00000260329 Gene

mRNA/cDNA for ENSG00000260329 Gene

6 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
6 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260329 Gene

No ASD Table

Relevant External Links for ENSG00000260329 Gene

GeneLoc Exon Structure for
ENSG00000260329

Expression for ENSG00000260329 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260329 Gene

genes like me logo Genes that share expression patterns with ENSG00000260329: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260329 Gene

Orthologs for ENSG00000260329 Gene

Evolution for ENSG00000260329 Gene

ENSEMBL:
Gene Tree for ENSG00000260329 (if available)
TreeFam:
Gene Tree for ENSG00000260329 (if available)

No data available for Orthologs for ENSG00000260329 Gene

Paralogs for ENSG00000260329 Gene

No data available for Paralogs for ENSG00000260329 Gene

Variants for ENSG00000260329 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260329 Gene

Disorders for ENSG00000260329 Gene

No disorders were found for ENSG00000260329 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260329 Gene

Publications for ENSG00000260329 Gene

No publications were found for ENSG00000260329 Gene.

No data available for Mastermind for ENSG00000260329 Gene

Products for ENSG00000260329 Gene

Sources for ENSG00000260329 Gene