Aliases for ENSG00000260296 Gene

Subcategory (RNA class) for ENSG00000260296 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000260296 Gene

  • Novel Transcript, Overlapping N4BP2 5
  • NONHSAG037804.2 91
  • Lnc-N4BP2-1 165
  • AC095057.3 5

External Ids for ENSG00000260296 Gene

Summaries for ENSG00000260296 Gene

GeneCards Summary for ENSG00000260296 Gene

ENSG00000260296 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260296 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260296 Gene

Genomics for ENSG00000260296 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000260296 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J040165 Enhancer 0.2 Ensembl 600.7 -0.4 -406 1.4 ENSG00000260296 RHOH RNU7-74P piR-36393-383 N4BP2
GH04J039814 Enhancer 1 Ensembl ENCODE 12.6 -351.4 -351418 1.6 HNRNPL PRDM10 ZNF501 ZNF239 KLF9 YBX3 ZNF639 RELB EGR1 ZNF248 HSALNG0033972 ENSG00000260296 WDR19 N4BP2 lnc-UBE2K-3 piR-32214-529 UBE2K PDS5A
GH04J040336 Enhancer 0.6 dbSUPER 6.3 +171.4 171397 2.4 CEBPA HMBOX1 NFE2 ZNF316 NFIC ZNF48 ZMYM3 HLF CEBPB GATA2 RNU7-74P LOC344967 N4BP2 ENSG00000260296 CHRNA9 piR-43106-158 RBM47
GH04J040003 Enhancer 0.7 Ensembl 4.5 -162.4 -162406 1.8 IKZF1 JUND ETV6 NR2C1 DPF2 HDAC1 EP300 HMBOX1 CEBPB ZNF316 N4BP2 SMIM14 RPL9 ENSG00000260296 KRT18P25 PDS5A lnc-N4BP2-4
GH04J040182 Promoter/Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +18.8 18794 5 BACH1 STAT3 RELA TCF12 IKZF2 RCOR1 TRIM22 YY1 PKNOX1 EED ENSG00000286089 HSALNG0033997 CHRNA9 RNU7-74P UGDH-AS1 RBM47 RHOH ENSG00000260296 N4BP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260296 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000260296 Gene

Genomic Locations for ENSG00000260296 Gene
chr4:40,166,507-40,167,831
(GRCh38/hg38)
Size:
1,325 bases
Orientation:
Plus strand
chr4:40,168,295-40,169,451
(GRCh37/hg19)
Size:
1,157 bases
Orientation:
Plus strand

Genomic View for ENSG00000260296 Gene

Genes around ENSG00000260296 on UCSC Golden Path with GeneCards custom track
ENSG00000260296 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000260296 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260296 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260296 Gene

Proteins for ENSG00000260296 Gene

Post-translational modifications for ENSG00000260296 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260296 Gene

Domains & Families for ENSG00000260296 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260296 Gene

Function for ENSG00000260296 Gene

Phenotypes From GWAS Catalog for ENSG00000260296 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260296 Gene

Localization for ENSG00000260296 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260296 Gene

Pathways & Interactions for ENSG00000260296 Gene

PathCards logo

SuperPathways for ENSG00000260296 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000260296 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260296 Gene

Drugs & Compounds for ENSG00000260296 Gene

No Compound Related Data Available

Transcripts for ENSG00000260296 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000260296 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000085EF3_9606 lncRNA 1157 3

Ensembl: ENST00000567102 (view in UCSC) ,

LNCipedia: lnc-N4BP2-1:1,

NONCODE: NONHSAT096119.2,

URS0000D5892A_9606 lncRNA 1206 1

LNCipedia: lnc-N4BP2-1:2,

ENSG00000260296 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260296 Gene

No ASD Table

Relevant External Links for ENSG00000260296 Gene

GeneLoc Exon Structure for
ENSG00000260296

No data available for mRNA/cDNA for ENSG00000260296 Gene

Expression for ENSG00000260296 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260296 Gene

genes like me logo Genes that share expression patterns with ENSG00000260296: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260296 Gene

Orthologs for ENSG00000260296 Gene

Evolution for ENSG00000260296 Gene

ENSEMBL:
Gene Tree for ENSG00000260296 (if available)
TreeFam:
Gene Tree for ENSG00000260296 (if available)

No data available for Orthologs for ENSG00000260296 Gene

Paralogs for ENSG00000260296 Gene

No data available for Paralogs for ENSG00000260296 Gene

Variants for ENSG00000260296 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260296 Gene

Disorders for ENSG00000260296 Gene

Additional Disease Information for ENSG00000260296

No disorders were found for ENSG00000260296 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000260296 Gene

Publications for ENSG00000260296 Gene

No publications were found for ENSG00000260296 Gene.

No data available for Mastermind for ENSG00000260296 Gene

Products for ENSG00000260296 Gene

Sources for ENSG00000260296 Gene