Aliases for ENSG00000260136 Gene

Subcategory (RNA class) for ENSG00000260136 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000260136 Gene

  • Novel Transcript 5
  • NONHSAG018893 92
  • HSALNG0110246 167
  • Lnc-SCNN1B-1 168
  • AC008915.2 5

External Ids for ENSG00000260136 Gene

Summaries for ENSG00000260136 Gene

GeneCards Summary for ENSG00000260136 Gene

ENSG00000260136 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260136 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260136 Gene

Genomics for ENSG00000260136 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260136 Gene

Promoters and enhancers for ENSG00000260136 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J023452 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 500.7 -0.2 -157 2.8 EP300 FOXK2 ZBTB40 ZNF217 SIN3A NRF1 TCF12 POLR2G NCOR1 GTF2E2 COG7 ENSG00000260136 DCTN5 ENSG00000260751 SCNN1B ENSG00000261723 NPIPB5 PALB2 UBFD1 ENSG00000259782
GH16J023408 Enhancer 1.2 FANTOM5 Ensembl ENCODE 9.9 -43.3 -43258 2.3 ZSCAN5C JUND ZNF639 ZIC2 ZNF662 ATF2 ZEB1 ZNF148 OSR2 SALL2 lnc-SCNN1B-2 ENSG00000260482 DCTN5 PALB2 SCNN1B NPIPB5 COG7 ENSG00000260136 NONHSAG018890.2 lnc-GGA2-3
GH16J023448 Enhancer 0.4 Ensembl ENCODE 0.7 -4.1 -4063 1 ZNF600 ENSG00000259782 piR-43107-106 DCTN5 COG7 ENSG00000260136
GH16J023449 Enhancer 0.2 Ensembl 0.7 -3.4 -3357 0.4 COG7 ENSG00000259782 ENSG00000260136
GH16J023450 Enhancer 0.2 Ensembl 0.7 -2.7 -2657 0.2 COG7 ENSG00000259782 ENSG00000260136
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260136 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260136 Gene

Genomic Locations for ENSG00000260136 Gene
chr16:23,452,758-23,457,606
(GRCh38/hg38)
Size:
4,849 bases
Orientation:
Plus strand
chr16:23,464,079-23,468,927
(GRCh37/hg19)
Size:
4,849 bases
Orientation:
Plus strand

Genomic View for ENSG00000260136 Gene

Genes around ENSG00000260136 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260136 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260136 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260136 Gene

Proteins for ENSG00000260136 Gene

Post-translational modifications for ENSG00000260136 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260136 Gene

Domains & Families for ENSG00000260136 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260136 Gene

Function for ENSG00000260136 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260136 Gene

Localization for ENSG00000260136 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260136 Gene

Pathways & Interactions for ENSG00000260136 Gene

PathCards logo

SuperPathways for ENSG00000260136 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000260136 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260136 Gene

Drugs & Compounds for ENSG00000260136 Gene

No Compound Related Data Available

Transcripts for ENSG00000260136 Gene

mRNA/cDNA for ENSG00000260136 Gene

7 RNACentral transcripts :
4 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
1 LncBook transcripts :
3 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260136 Gene

No ASD Table

Relevant External Links for ENSG00000260136 Gene

GeneLoc Exon Structure for
ENSG00000260136

Expression for ENSG00000260136 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260136 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000260136 Gene

This gene is overexpressed in Testis (x5.0).
genes like me logo Genes that share expression patterns with ENSG00000260136: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260136 Gene

Orthologs for ENSG00000260136 Gene

Evolution for ENSG00000260136 Gene

ENSEMBL:
Gene Tree for ENSG00000260136 (if available)
TreeFam:
Gene Tree for ENSG00000260136 (if available)

No data available for Orthologs for ENSG00000260136 Gene

Paralogs for ENSG00000260136 Gene

No data available for Paralogs for ENSG00000260136 Gene

Variants for ENSG00000260136 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260136 Gene

Disorders for ENSG00000260136 Gene

No disorders were found for ENSG00000260136 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260136 Gene

Publications for ENSG00000260136 Gene

No publications were found for ENSG00000260136 Gene.

No data available for Mastermind for ENSG00000260136 Gene

Products for ENSG00000260136 Gene

Sources for ENSG00000260136 Gene