ENSG00000260109 Gene (Pseudogene)

 

GC15P067985
GIFtS:
4

Aliases for ENSG00000260109 Gene

Aliases for ENSG00000260109 Gene

  • Ribosomal Protein S27a (RPS27A) Pseudogene 5
  • AC135628.1 5

External Ids for ENSG00000260109 Gene

Previous GeneCards Identifiers for ENSG00000260109 Gene

  • GC15P068277

Summaries for ENSG00000260109 Gene

GeneCards Summary for ENSG00000260109 Gene

ENSG00000260109 is a Pseudogene.

Additional gene information for ENSG00000260109 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260109 Gene

Genomics for ENSG00000260109 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260109 Gene

Promoters and enhancers for ENSG00000260109 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH15J067997 Enhancer 1 Ensembl ENCODE 0.4 +13.9 13853 2.6 ZNF217 TCF12 JUND FOS CUX1 EP300 GATAD2B CTBP1 ZNF341 OSR2 PIAS1 lnc-PIAS1-1 ENSG00000260109 HSALNG0106782
GH15J067981 Enhancer 0.5 Ensembl 0.7 -3.5 -3458 0.8 TEAD4 RBM25 ZMYM3 ZFP36 ESRRA ZNF580 PIAS1 ENSG00000260109 lnc-PIAS1-1 LOC100286942
GH15J068023 Enhancer 1 FANTOM5 Ensembl 0.3 +38.8 38841 5 CTBP1 HINFP RELA FOXA2 GTF2A2 NR2F2 FOSL1 NR3C1 ZNF644 IRF1 CORO2B PIAS1 CLN6 HSALNG0106782 ENSG00000260109 lnc-PIAS1-1
GH15J067977 Enhancer 0.6 Ensembl 0.4 -7.6 -7558 0.2 ZNF644 IRF1 ZNF395 MEIS2 AFF1 ID3 IKZF1 PKNOX1 ZNF740 ZNF639 LOC100286942 ENSG00000260109 lnc-PIAS1-1
GH15J068009 Enhancer 0.7 Ensembl ENCODE 0.4 +24.8 24842 4.6 TEAD4 SPI1 FOXA1 SCRT1 POLR2A MYC MAFK IKZF1 PRDM10 ZNF316 ENSG00000260657 PIAS1 CLN6 ENSG00000260109 lnc-PIAS1-1 HSALNG0106782
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260109 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260109 Gene

Genomic Locations for ENSG00000260109 Gene
chr15:67,985,059-67,986,288
(GRCh38/hg38)
Size:
1,230 bases
Orientation:
Plus strand
chr15:68,277,397-68,278,626
(GRCh37/hg19)
Size:
1,230 bases
Orientation:
Plus strand

Genomic View for ENSG00000260109 Gene

Genes around ENSG00000260109 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260109 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260109 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000260109 Gene

Proteins for ENSG00000260109 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000260109 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260109 Gene

Domains & Families for ENSG00000260109 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260109 Gene

Function for ENSG00000260109 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ENSG00000260109 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260109 Gene

Localization for ENSG00000260109 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260109 Gene

Pathways & Interactions for ENSG00000260109 Gene

PathCards logo

SuperPathways for ENSG00000260109 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000260109 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260109 Gene

Drugs & Compounds for ENSG00000260109 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000260109 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000260109 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260109 Gene

No ASD Table

Relevant External Links for ENSG00000260109 Gene

GeneLoc Exon Structure for
ENSG00000260109

Expression for ENSG00000260109 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260109 Gene

mRNA expression in normal human tissues for ENSG00000260109 Gene
mRNA expression by GTEx for ENSG00000260109 Gene
genes like me logo Genes that share expression patterns with ENSG00000260109: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260109 Gene

Orthologs for ENSG00000260109 Gene

Evolution for ENSG00000260109 Gene

ENSEMBL:
Gene Tree for ENSG00000260109 (if available)
TreeFam:
Gene Tree for ENSG00000260109 (if available)

No data available for Orthologs for ENSG00000260109 Gene

Paralogs for ENSG00000260109 Gene

No data available for Paralogs for ENSG00000260109 Gene

Variants for ENSG00000260109 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260109 Gene

Disorders for ENSG00000260109 Gene

No disorders were found for ENSG00000260109 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260109 Gene

Publications for ENSG00000260109 Gene

No publications were found for ENSG00000260109 Gene.

No data available for Mastermind for ENSG00000260109 Gene

Products for ENSG00000260109 Gene

Sources for ENSG00000260109 Gene