Aliases for ENSG00000260086 Gene

Subcategory (RNA class) for ENSG00000260086 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000260086 Gene

  • Novel Transcript 5
  • HSALNG0111255 167
  • NONHSAG019383 92
  • Lnc-LONP2-6 168
  • AC007611.1 5

External Ids for ENSG00000260086 Gene

Previous GeneCards Identifiers for ENSG00000260086 Gene

  • GC16P048659
  • GC16P048660
  • GC16P048662

Summaries for ENSG00000260086 Gene

GeneCards Summary for ENSG00000260086 Gene

ENSG00000260086 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260086 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260086 Gene

Genomics for ENSG00000260086 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260086 Gene

Promoters and enhancers for ENSG00000260086 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J048622 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 +0.3 268 2.2 CTCF SIN3A POLR2G USF1 ZIC2 TCF7 ZBTB26 TARDBP REST ZBTB25 ENSG00000260086 LOC105371240 N4BP1 SIAH1 ENSG00000260052 L13713-090
GH16J048621 Promoter/Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 500.7 -1.8 -1768 0.7 CTBP1 FOXA2 PBX2 SPI1 TCF12 MEIS2 CBFA2T3 N4BP1 ENSG00000259912 ENSG00000260086 LOC105371240 RF00017-2065 SIAH1
GH16J048630 Enhancer 0.8 ENCODE 0.4 +7.2 7153 0.2 CTCF REST ZBTB25 RAD21 SKI TRIM22 TEAD1 SMC3 MXI1 ZSCAN9 L13713-090 LONP2 ABCC11 ENSG00000260052 ENSG00000261267 ENSG00000260086 LOC105371240
GH16J048632 Enhancer 0.7 ENCODE 0.4 +9.1 9083 0.2 TGIF2 TEAD1 KMT2B SIN3A USF1 TFDP1 SAP130 MXD4 NR3C1 ZGPAT L13713-090 ENSG00000260052 ENSG00000260086 LOC105371240
GH16J048687 Enhancer 0.6 Ensembl 0.2 +64.2 64213 0.6 CTCF REST RAD21 TRIM22 SMC3 KLF9 ZFP36 ZNF335 ZNF654 GATAD1 piR-38352-222 RF00994-382 ENSG00000260086 LOC105371240
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260086 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260086 Gene

Genomic Locations for ENSG00000260086 Gene
chr16:48,623,422-48,746,318
(GRCh38/hg38)
Size:
122,897 bases
Orientation:
Plus strand
chr16:48,657,347-48,778,553
(GRCh37/hg19)
Size:
121,207 bases
Orientation:
Plus strand

Genomic View for ENSG00000260086 Gene

Genes around ENSG00000260086 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260086 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260086 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260086 Gene

Proteins for ENSG00000260086 Gene

Post-translational modifications for ENSG00000260086 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260086 Gene

Domains & Families for ENSG00000260086 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260086 Gene

Function for ENSG00000260086 Gene

Phenotypes From GWAS Catalog for ENSG00000260086 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260086 Gene

Localization for ENSG00000260086 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260086 Gene

Pathways & Interactions for ENSG00000260086 Gene

PathCards logo

SuperPathways for ENSG00000260086 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000260086 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260086 Gene

Drugs & Compounds for ENSG00000260086 Gene

No Compound Related Data Available

Transcripts for ENSG00000260086 Gene

mRNA/cDNA for ENSG00000260086 Gene

13 RNACentral transcripts :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
6 NONCODE transcripts :
5 LncBook transcripts :
10 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260086 Gene

No ASD Table

Relevant External Links for ENSG00000260086 Gene

GeneLoc Exon Structure for
ENSG00000260086

Expression for ENSG00000260086 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260086 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000260086 Gene

This gene is overexpressed in Whole Blood (x10.6).
genes like me logo Genes that share expression patterns with ENSG00000260086: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260086 Gene

Orthologs for ENSG00000260086 Gene

Evolution for ENSG00000260086 Gene

ENSEMBL:
Gene Tree for ENSG00000260086 (if available)
TreeFam:
Gene Tree for ENSG00000260086 (if available)

No data available for Orthologs for ENSG00000260086 Gene

Paralogs for ENSG00000260086 Gene

No data available for Paralogs for ENSG00000260086 Gene

Variants for ENSG00000260086 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260086 Gene

Disorders for ENSG00000260086 Gene

No disorders were found for ENSG00000260086 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260086 Gene

Publications for ENSG00000260086 Gene

No publications were found for ENSG00000260086 Gene.

No data available for Mastermind for ENSG00000260086 Gene

Products for ENSG00000260086 Gene

Sources for ENSG00000260086 Gene