Aliases for ENSG00000260041 Gene

Subcategory (RNA class) for ENSG00000260041 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000260041 Gene

  • Novel Transcript 5
  • HSALNG0111667 167
  • NONHSAG019517 92
  • Lnc-GNAO1-1 168
  • AC007495.1 5

External Ids for ENSG00000260041 Gene

Summaries for ENSG00000260041 Gene

GeneCards Summary for ENSG00000260041 Gene

ENSG00000260041 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260041 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260041 Gene

Genomics for ENSG00000260041 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260041 Gene

Promoters and enhancers for ENSG00000260041 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J056108 Enhancer 0.4 Ensembl 500.7 -1.0 -1037 1 EP300 SMC3 POLR2A RAD21 ENSG00000260041 ENSG00000279523 LOC102725116 ENSG00000246379 piR-38051-116 LOC283856
GH16J056109 Enhancer 0.3 Ensembl 500.7 +0.1 64 0.4 SMC3 ENSG00000260041 ENSG00000279523 LOC102725116 ENSG00000246379 piR-32461-069 LOC283856
GH16J056110 Enhancer 0.2 Ensembl 500.7 +0.6 564 0.2 ENSG00000260041 ENSG00000279523 LOC102725116 ENSG00000246379 piR-32461-069 LOC283856
GH16J056284 Enhancer 0.9 dbSUPER 5.8 +178.3 178271 6 PHB2 ZBTB11 TARDBP HES1 MYC CTBP1 HDAC3 NCOR1 MBD2 TRIM25 GNAO1 ENSG00000260041 ENSG00000260198 LPCAT2 ENSG00000287866 piR-53917
GH16J056116 Enhancer 0.8 FANTOM5 Ensembl ENCODE 0.4 +7.0 6964 2.2 EP300 SMC3 MXI1 RFX1 POLR2A RAD21 EZH2 GNAO1 SLC6A2 MT4 ENSG00000260041 LOC102725116 piR-32461-069 ENSG00000246379 LOC283856
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260041 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260041 Gene

Genomic Locations for ENSG00000260041 Gene
chr16:56,109,537-56,137,000
(GRCh38/hg38)
Size:
27,464 bases
Orientation:
Plus strand
chr16:56,143,449-56,170,912
(GRCh37/hg19)
Size:
27,464 bases
Orientation:
Plus strand

Genomic View for ENSG00000260041 Gene

Genes around ENSG00000260041 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260041 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260041 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260041 Gene

Proteins for ENSG00000260041 Gene

Post-translational modifications for ENSG00000260041 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260041 Gene

Domains & Families for ENSG00000260041 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260041 Gene

Function for ENSG00000260041 Gene

Phenotypes From GWAS Catalog for ENSG00000260041 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260041 Gene

Localization for ENSG00000260041 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260041 Gene

Pathways & Interactions for ENSG00000260041 Gene

PathCards logo

SuperPathways for ENSG00000260041 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000260041 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260041 Gene

Drugs & Compounds for ENSG00000260041 Gene

No Compound Related Data Available

Transcripts for ENSG00000260041 Gene

mRNA/cDNA for ENSG00000260041 Gene

9 RNACentral transcripts :
2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
9 NONCODE transcripts :
5 LncBook transcripts :
8 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260041 Gene

No ASD Table

Relevant External Links for ENSG00000260041 Gene

GeneLoc Exon Structure for
ENSG00000260041

Expression for ENSG00000260041 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260041 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000260041 Gene

This gene is overexpressed in Testis (x48.9).
genes like me logo Genes that share expression patterns with ENSG00000260041: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260041 Gene

Orthologs for ENSG00000260041 Gene

Evolution for ENSG00000260041 Gene

ENSEMBL:
Gene Tree for ENSG00000260041 (if available)
TreeFam:
Gene Tree for ENSG00000260041 (if available)

No data available for Orthologs for ENSG00000260041 Gene

Paralogs for ENSG00000260041 Gene

No data available for Paralogs for ENSG00000260041 Gene

Variants for ENSG00000260041 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260041 Gene

Disorders for ENSG00000260041 Gene

No disorders were found for ENSG00000260041 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260041 Gene

Publications for ENSG00000260041 Gene

No publications were found for ENSG00000260041 Gene.

No data available for Mastermind for ENSG00000260041 Gene

Products for ENSG00000260041 Gene

Sources for ENSG00000260041 Gene