Aliases for ENSG00000260037 Gene

Subcategory (RNA class) for ENSG00000260037 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000260037 Gene

  • Novel Transcript, Antisense To MYO9A 5
  • HSALNG0107017 167
  • NONHSAG017330 92
  • Lnc-NR2E3-3 168
  • AC104938.1 5

External Ids for ENSG00000260037 Gene

Previous GeneCards Identifiers for ENSG00000260037 Gene

  • GC15P072111

Summaries for ENSG00000260037 Gene

GeneCards Summary for ENSG00000260037 Gene

ENSG00000260037 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260037 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260037 Gene

Genomics for ENSG00000260037 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260037 Gene

Promoters and enhancers for ENSG00000260037 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J071201 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.1 -614.9 -614895 4.6 ZNF300 TEAD4 ZIC2 ZNF662 HDAC2 FOXA2 ZNF148 ZNF491 ZNF132 SALL2 MYO9A ENSG00000212664 LRRC49 THAP10 HMGB1P6 ENSG00000259744 ENSG00000260037 piR-36679 THSD4-AS1 THSD4
GH15J072135 Enhancer 0.8 Ensembl 10.1 +317.8 317805 0.8 EP300 ZSCAN5C ZNF300 ZNF639 ZNF10 ZNF623 ZNF510 ZNF662 OSR2 ZNF491 ENSG00000243568 RPL21P115 lnc-TMEM202-4 ENSG00000261187 ENSG00000212664 MYO9A CELF6 SENP8 PARP6 RNU2-65P
GH15J072797 Enhancer 1 ENCODE dbSUPER 4.2 +978.9 978859 0.2 PHF8 CTCF ZIC2 ZBTB26 EZH2 ZNF341 SIN3A HDAC2 MYC BCL11A ENSG00000260037 piR-56759-186 ADPGK ADPGK-AS1
GH15J072798 Enhancer 0.3 Ensembl 4.5 +980.7 980705 1.4 HLF ZSCAN4 ADPGK-AS1 ENSG00000260037 piR-56759-186 ADPGK
GH15J072769 Enhancer 0.3 FANTOM5 4.1 +951.0 950987 0.3 KDM1A ADPGK ARIH1 ENSG00000260037 CELF6 PARP6 lnc-HIGD2B-2 ADPGK-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260037 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260037 Gene

Genomic Locations for ENSG00000260037 Gene
chr15:71,818,396-71,823,384
(GRCh38/hg38)
Size:
4,989 bases
Orientation:
Plus strand
chr15:72,110,737-72,115,725
(GRCh37/hg19)
Size:
4,989 bases
Orientation:
Plus strand

Genomic View for ENSG00000260037 Gene

Genes around ENSG00000260037 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260037 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260037 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260037 Gene

Proteins for ENSG00000260037 Gene

Post-translational modifications for ENSG00000260037 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260037 Gene

Domains & Families for ENSG00000260037 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260037 Gene

Function for ENSG00000260037 Gene

Phenotypes From GWAS Catalog for ENSG00000260037 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260037 Gene

Localization for ENSG00000260037 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260037 Gene

Pathways & Interactions for ENSG00000260037 Gene

PathCards logo

SuperPathways for ENSG00000260037 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000260037 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260037 Gene

Drugs & Compounds for ENSG00000260037 Gene

No Compound Related Data Available

Transcripts for ENSG00000260037 Gene

mRNA/cDNA for ENSG00000260037 Gene

4 RNACentral transcripts :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
4 LncBook transcripts :
4 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260037 Gene

No ASD Table

Relevant External Links for ENSG00000260037 Gene

GeneLoc Exon Structure for
ENSG00000260037

Expression for ENSG00000260037 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260037 Gene

genes like me logo Genes that share expression patterns with ENSG00000260037: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260037 Gene

Orthologs for ENSG00000260037 Gene

Evolution for ENSG00000260037 Gene

ENSEMBL:
Gene Tree for ENSG00000260037 (if available)
TreeFam:
Gene Tree for ENSG00000260037 (if available)

No data available for Orthologs for ENSG00000260037 Gene

Paralogs for ENSG00000260037 Gene

No data available for Paralogs for ENSG00000260037 Gene

Variants for ENSG00000260037 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260037 Gene

Disorders for ENSG00000260037 Gene

No disorders were found for ENSG00000260037 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260037 Gene

Publications for ENSG00000260037 Gene

No publications were found for ENSG00000260037 Gene.

No data available for Mastermind for ENSG00000260037 Gene

Products for ENSG00000260037 Gene

Sources for ENSG00000260037 Gene