Aliases for ENSG00000260015 Gene

Subcategory (RNA class) for ENSG00000260015 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000260015 Gene

  • Novel Transcript, Sense Intronic To ZNF19 5
  • NONHSAG019892 92
  • AC010547.2 5
  • Lnc-TAT-1 168

External Ids for ENSG00000260015 Gene

Previous GeneCards Identifiers for ENSG00000260015 Gene

  • GC16M071573

Summaries for ENSG00000260015 Gene

GeneCards Summary for ENSG00000260015 Gene

ENSG00000260015 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000260015 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000260015 Gene

Genomics for ENSG00000260015 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000260015 Gene

Promoters and enhancers for ENSG00000260015 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J071525 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE 0.4 +15.6 15556 2.3 MYC JUND ZIC2 POLR2A OSR2 ZBTB17 MXI1 FOS YY1 PHF8 CHST4 ZNF23 ENSG00000260015 lnc-TAT-6 ZNF19
GH16J071537 Enhancer 0.6 ENCODE 0.7 +4.0 3952 0.2 CTCF REST RAD21 TRIM22 SMC3 DEK BATF ZNF654 SCRT1 XRCC5 ENSG00000260015 CHST4 ZNF19 lnc-TAT-6
GH16J071557 Enhancer 0.7 ENCODE 0.4 -16.6 -16589 1.3 NCOR1 FOXA2 MAFK JUND FOXP1 CHD4 EHMT2 RXRA RARA MAX ZNF19 RNU6-1061P RF00026-409 lnc-TAT-6 ENSG00000260015
GH16J071555 Enhancer 0.6 Ensembl 0.4 -13.8 -13776 0.8 FOXA2 NR2F2 ZBTB33 JUND RAD21 RXRA MAX HNF4A FOXA1 CEBPB PHLPP2 ENSG00000247324 HPR IL34 ZNF19 RNU6-1061P RF00026-409 lnc-TAT-6 ENSG00000260015
GH16J071547 Enhancer 0.4 FANTOM5 0.4 -5.2 -5224 0.1 NFE2 NFE2L2 ENSG00000260015 ZNF19 lnc-TAT-6 RF00026-409 RNU6-1061P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000260015 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000260015 Gene

Genomic Locations for ENSG00000260015 Gene
chr16:71,539,834-71,541,825
(GRCh38/hg38)
Size:
1,992 bases
Orientation:
Minus strand
chr16:71,573,737-71,575,728
(GRCh37/hg19)
Size:
1,992 bases
Orientation:
Minus strand

Genomic View for ENSG00000260015 Gene

Genes around ENSG00000260015 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000260015 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000260015 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000260015 Gene

Proteins for ENSG00000260015 Gene

Post-translational modifications for ENSG00000260015 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000260015 Gene

Domains & Families for ENSG00000260015 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000260015 Gene

Function for ENSG00000260015 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000260015 Gene

Localization for ENSG00000260015 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000260015 Gene

Pathways & Interactions for ENSG00000260015 Gene

PathCards logo

SuperPathways for ENSG00000260015 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000260015 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000260015 Gene

Drugs & Compounds for ENSG00000260015 Gene

No Compound Related Data Available

Transcripts for ENSG00000260015 Gene

mRNA/cDNA for ENSG00000260015 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000260015 Gene

No ASD Table

Relevant External Links for ENSG00000260015 Gene

GeneLoc Exon Structure for
ENSG00000260015

Expression for ENSG00000260015 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000260015 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000260015 Gene

This gene is overexpressed in Pancreas (x22.5) and Liver (x16.5).
genes like me logo Genes that share expression patterns with ENSG00000260015: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000260015 Gene

Orthologs for ENSG00000260015 Gene

Evolution for ENSG00000260015 Gene

ENSEMBL:
Gene Tree for ENSG00000260015 (if available)
TreeFam:
Gene Tree for ENSG00000260015 (if available)

No data available for Orthologs for ENSG00000260015 Gene

Paralogs for ENSG00000260015 Gene

No data available for Paralogs for ENSG00000260015 Gene

Variants for ENSG00000260015 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000260015 Gene

Disorders for ENSG00000260015 Gene

No disorders were found for ENSG00000260015 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000260015 Gene

Publications for ENSG00000260015 Gene

No publications were found for ENSG00000260015 Gene.

No data available for Mastermind for ENSG00000260015 Gene

Products for ENSG00000260015 Gene

Sources for ENSG00000260015 Gene