Aliases for ENSG00000259995 Gene

Subcategory (RNA class) for ENSG00000259995 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000259995 Gene

  • Novel Transcript 5
  • NONHSAG020032.2 91
  • HSALNG0112802 164
  • AC106729.1 5
  • LINC02125 165

External Ids for ENSG00000259995 Gene

Previous GeneCards Identifiers for ENSG00000259995 Gene

  • GC16P076770

Summaries for ENSG00000259995 Gene

GeneCards Summary for ENSG00000259995 Gene

ENSG00000259995 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000259995 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259995 Gene

Genomics for ENSG00000259995 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000259995 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J076804 Enhancer 0.6 Ensembl 0.2 +69.0 68982 0.2 IKZF2 PKNOX1 CREB1 BCL11A IKZF1 FOSL2 JUNB BATF FOS ATF7 LOC105376774 MIR4719 ENSG00000259995 MON1B ENSG00000287694
GH16J076750 Enhancer 0.2 FANTOM5 0.4 +14.3 14293 0.2 MF281437-027 ENSG00000259995 lnc-CNTNAP4-3 ENSG00000287694 MON1B
GH16J076805 Enhancer 0.3 Ensembl 0.2 +69.4 69382 0.2 IKZF1 IKZF2 LOC105376774 MIR4719 ENSG00000259995 MON1B ENSG00000287694
GH16J076834 Enhancer 0.4 ENCODE 0.2 +99.3 99329 2 CREB1 ATF7 ATF2 JUND MIR4719 LOC105376774 ENSG00000259995 MON1B ENSG00000287694
GH16J076901 Enhancer 0.6 ENCODE 0.1 +164.1 164120 0.2 REST SP1 FOXA2 YY1 JUND RAD21 HNF4A MAX SMARCA4 HNF4G ENSG00000260797 lnc-ADAMTS18-8 LOC100128497 ENSG00000259995 MON1B ENSG00000287694
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259995 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000259995 Gene

Genomic Locations for ENSG00000259995 Gene
chr16:76,736,319-76,928,169
(GRCh38/hg38)
Size:
191,851 bases
Orientation:
Plus strand
chr16:76,770,239-76,962,066
(GRCh37/hg19)
Size:
191,828 bases
Orientation:
Plus strand

Genomic View for ENSG00000259995 Gene

Genes around ENSG00000259995 on UCSC Golden Path with GeneCards custom track
ENSG00000259995 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000259995 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259995 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259995 Gene

Proteins for ENSG00000259995 Gene

Post-translational modifications for ENSG00000259995 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259995 Gene

Domains & Families for ENSG00000259995 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259995 Gene

Function for ENSG00000259995 Gene

Phenotypes From GWAS Catalog for ENSG00000259995 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259995 Gene

Localization for ENSG00000259995 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259995 Gene

Pathways & Interactions for ENSG00000259995 Gene

PathCards logo

SuperPathways for ENSG00000259995 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000259995 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259995 Gene

Drugs & Compounds for ENSG00000259995 Gene

No Compound Related Data Available

Transcripts for ENSG00000259995 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000259995 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004D1520_9606 lncRNA 466 4

Ensembl: ENST00000567777 (view in UCSC) ,

LncBook: HSALNT0233737,

LNCipedia: LINC02125:9,

NONCODE: NONHSAT143785.2,

URS00009BD32F_9606 lncRNA 564 2

LncBook: HSALNT0233735,

NONCODE: NONHSAT173295.1,

URS0000D5E048_9606 lncRNA 7133 1

LNCipedia: LINC02125:8,

URS0000D5D6E5_9606 lncRNA 7032 1

LNCipedia: LINC02125:7,

ENSG00000259995 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259995 Gene

No ASD Table

Relevant External Links for ENSG00000259995 Gene

GeneLoc Exon Structure for
ENSG00000259995

No data available for mRNA/cDNA for ENSG00000259995 Gene

Expression for ENSG00000259995 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000259995 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000259995 Gene

This gene is overexpressed in Testis (x53.0).
genes like me logo Genes that share expression patterns with ENSG00000259995: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259995 Gene

Orthologs for ENSG00000259995 Gene

Evolution for ENSG00000259995 Gene

ENSEMBL:
Gene Tree for ENSG00000259995 (if available)
TreeFam:
Gene Tree for ENSG00000259995 (if available)

No data available for Orthologs for ENSG00000259995 Gene

Paralogs for ENSG00000259995 Gene

No data available for Paralogs for ENSG00000259995 Gene

Variants for ENSG00000259995 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259995 Gene

Disorders for ENSG00000259995 Gene

Additional Disease Information for ENSG00000259995

No disorders were found for ENSG00000259995 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000259995 Gene

Publications for ENSG00000259995 Gene

No publications were found for ENSG00000259995 Gene.

No data available for Mastermind for ENSG00000259995 Gene

Products for ENSG00000259995 Gene

Sources for ENSG00000259995 Gene