Aliases for ENSG00000259994 Gene

Subcategory (RNA class) for ENSG00000259994 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000259994 Gene

  • Novel Transcript, Overlapping To MTPAP 5
  • NONHSAG005523 94
  • Lnc-MTPAP-1 170
  • AL353796.1 5

External Ids for ENSG00000259994 Gene

Previous GeneCards Identifiers for ENSG00000259994 Gene

  • GC10M030592
  • GC10M030594
  • GC10M030599

Summaries for ENSG00000259994 Gene

GeneCards Summary for ENSG00000259994 Gene

ENSG00000259994 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000259994 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259994 Gene

Genomics for ENSG00000259994 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000259994 Gene

Promoters and enhancers for ENSG00000259994 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J029810 Enhancer 1.3 Ensembl ENCODE dbSUPER 29 +494.0 493990 3.4 E2F8 GATA3 POLR2A TCF7L2 ZNF217 ZNF362 RAD21 ZNF121 MNT NFIB HSALNG0076987 ENSG00000259994 SVIL LOC105376476 lnc-JCAD-2
GH10J029642 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 13.6 +659.8 659828 8.5 NR2F1 NR2F6 ZNF362 HLF CEBPG SP7 ZSCAN21 ZNF680 HNF1A SP5 SVIL lnc-JCAD-8 ENSG00000259994 RNU6-908P piR-31534-061 lnc-JCAD-7
GH10J029757 Enhancer 0.9 Ensembl ENCODE 32.8 +547.6 547566 3 SP1 ZNF680 ZNF404 ZNF560 ZNF547 ZBTB8A ZNF639 ZNF629 ZNF140 ZXDB ENSG00000259994 SVIL L13714-030 LOC105376475 lnc-JCAD-2
GH10J029813 Enhancer 0.7 dbSUPER 29 +491.9 491910 0.7 ZNF121 ZNF680 ZNF404 ZNF560 ZNF547 ZBTB8A ZNF639 ZNF629 ZNF501 ZNF140 ENSG00000259994 SVIL HSALNG0076987 LOC105376476 lnc-JCAD-2
GH10J030995 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.8 -692.0 -692035 6.2 MYC MAX ZFX SP1 MLLT1 PRDM1 TRIM24 IKZF1 ZNF143 ATF7 ZNF438 ENSG00000259994 LINC02664 DDX10P1 piR-57133-052
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259994 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000259994 Gene

Genomic Locations for ENSG00000259994 Gene
chr10:30,302,826-30,306,066
(GRCh38/hg38)
Size:
3,241 bases
Orientation:
Minus strand
chr10:30,591,755-30,594,995
(GRCh37/hg19)
Size:
3,241 bases
Orientation:
Minus strand

Genomic View for ENSG00000259994 Gene

Genes around ENSG00000259994 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000259994 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259994 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259994 Gene

Proteins for ENSG00000259994 Gene

Post-translational modifications for ENSG00000259994 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259994 Gene

Domains & Families for ENSG00000259994 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259994 Gene

Function for ENSG00000259994 Gene

Phenotypes From GWAS Catalog for ENSG00000259994 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259994 Gene

Localization for ENSG00000259994 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259994 Gene

Pathways & Interactions for ENSG00000259994 Gene

PathCards logo

SuperPathways for ENSG00000259994 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000259994 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000259994 Gene

Drugs & Compounds for ENSG00000259994 Gene

No Compound Related Data Available

Transcripts for ENSG00000259994 Gene

mRNA/cDNA for ENSG00000259994 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LNCipedia transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259994 Gene

No ASD Table

Relevant External Links for ENSG00000259994 Gene

GeneLoc Exon Structure for
ENSG00000259994

Expression for ENSG00000259994 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000259994 Gene

genes like me logo Genes that share expression patterns with ENSG00000259994: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259994 Gene

Orthologs for ENSG00000259994 Gene

Evolution for ENSG00000259994 Gene

ENSEMBL:
Gene Tree for ENSG00000259994 (if available)
TreeFam:
Gene Tree for ENSG00000259994 (if available)

No data available for Orthologs for ENSG00000259994 Gene

Paralogs for ENSG00000259994 Gene

No data available for Paralogs for ENSG00000259994 Gene

Variants for ENSG00000259994 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259994 Gene

Disorders for ENSG00000259994 Gene

No disorders were found for ENSG00000259994 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259994 Gene

Publications for ENSG00000259994 Gene

No publications were found for ENSG00000259994 Gene.

No data available for External Links for ENSG00000259994 Gene

Products for ENSG00000259994 Gene

Sources for ENSG00000259994 Gene