Aliases for ENSG00000259976 Gene

Subcategory (RNA class) for ENSG00000259976 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000259976 Gene

  • Novel Transcript 5
  • NONHSAG035786 92
  • Lnc-ZBTB20-1 168
  • AC093010.3 5

External Ids for ENSG00000259976 Gene

Previous GeneCards Identifiers for ENSG00000259976 Gene

  • GC03M114033

Summaries for ENSG00000259976 Gene

GeneCards Summary for ENSG00000259976 Gene

ENSG00000259976 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000259976 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259976 Gene

Genomics for ENSG00000259976 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000259976 Gene

Promoters and enhancers for ENSG00000259976 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J114330 Enhancer 0.7 Ensembl dbSUPER 500.7 +1.5 1513 0.4 EP300 ZNF384 BATF IKZF1 ATF2 TBX21 JUNB ATF7 BHLHE40 MTA2 ENSG00000259976 ZBTB20-AS1 MIR568 ZBTB20
GH03J115097 Promoter/Enhancer 1.8 Ensembl ENCODE CraniofacialAtlas dbSUPER 13.9 -769.8 -769772 4.2 FOXA1 POLR2A FOXA2 ZBTB17 REST SPI1 GATA3 CTCF ZNF335 STAT5A ZBTB20-AS4 ENSG00000259976 ZBTB20 lnc-ZNF80-4 YBX1P3 lnc-TIGIT-8
GH03J114446 Promoter/Enhancer 2 Ensembl ENCODE CraniofacialAtlas dbSUPER 11 -122.2 -122173 11.3 EP300 POLR2A RELA CTCF BCL11A WT1 NFIC ZBTB17 ZNF384 ZSCAN18 ENSG00000259976 ZBTB20-AS5 piR-35674-361 ZBTB20 lnc-ZNF80-4
GH03J113577 Enhancer 1 Ensembl ENCODE 19.1 +751.8 751751 1.1 ZNF217 CTCF TCF12 FOS REST CUX1 RAD21 TRIM22 TAF9B SMC3 piR-57461-157 ENSG00000240751 ENSG00000259976 SIDT1
GH03J113767 Enhancer 0.7 Ensembl dbSUPER 9.7 +560.4 560413 2.2 JUND FOS FOSL2 JUN ZNF426 CTCF ZFP64 ZNF34 ZC3H11A ZNF781 BOC GRAMD1C SPICE1 GTPBP8 ENSG00000259976 ATP6V1A HE855940 HSALNG0028123
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259976 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000259976 Gene

Genomic Locations for ENSG00000259976 Gene
chr3:114,314,501-114,329,714
(GRCh38/hg38)
Size:
15,214 bases
Orientation:
Minus strand
chr3:114,033,348-114,035,026
(GRCh37/hg19)
Size:
1,679 bases
Orientation:
Minus strand

Genomic View for ENSG00000259976 Gene

Genes around ENSG00000259976 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000259976 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259976 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259976 Gene

Proteins for ENSG00000259976 Gene

Post-translational modifications for ENSG00000259976 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259976 Gene

Domains & Families for ENSG00000259976 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259976 Gene

Function for ENSG00000259976 Gene

Phenotypes From GWAS Catalog for ENSG00000259976 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259976 Gene

Localization for ENSG00000259976 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259976 Gene

Pathways & Interactions for ENSG00000259976 Gene

PathCards logo

SuperPathways for ENSG00000259976 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000259976 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259976 Gene

Drugs & Compounds for ENSG00000259976 Gene

No Compound Related Data Available

Transcripts for ENSG00000259976 Gene

mRNA/cDNA for ENSG00000259976 Gene

4 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
4 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259976 Gene

No ASD Table

Relevant External Links for ENSG00000259976 Gene

GeneLoc Exon Structure for
ENSG00000259976

Expression for ENSG00000259976 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000259976 Gene

genes like me logo Genes that share expression patterns with ENSG00000259976: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259976 Gene

Orthologs for ENSG00000259976 Gene

Evolution for ENSG00000259976 Gene

ENSEMBL:
Gene Tree for ENSG00000259976 (if available)
TreeFam:
Gene Tree for ENSG00000259976 (if available)

No data available for Orthologs for ENSG00000259976 Gene

Paralogs for ENSG00000259976 Gene

No data available for Paralogs for ENSG00000259976 Gene

Variants for ENSG00000259976 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259976 Gene

Disorders for ENSG00000259976 Gene

No disorders were found for ENSG00000259976 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259976 Gene

Publications for ENSG00000259976 Gene

No publications were found for ENSG00000259976 Gene.

No data available for Mastermind for ENSG00000259976 Gene

Products for ENSG00000259976 Gene

Sources for ENSG00000259976 Gene