ENSG00000259931 Gene (Pseudogene)

 

GC15M075512
GIFtS:
4

Aliases for ENSG00000259931 Gene

Aliases for ENSG00000259931 Gene

  • Small Nuclear Ribonucleoprotein Polypeptide F (SNRPF) Pseudogene 5
  • AC105036.1 5

External Ids for ENSG00000259931 Gene

Previous GeneCards Identifiers for ENSG00000259931 Gene

  • GC15M075805

Summaries for ENSG00000259931 Gene

GeneCards Summary for ENSG00000259931 Gene

ENSG00000259931 is a Pseudogene.

Additional gene information for ENSG00000259931 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259931 Gene

Genomics for ENSG00000259931 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000259931 Gene

Promoters and enhancers for ENSG00000259931 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH15J075516 Enhancer 0.7 Ensembl ENCODE 0.7 -3.6 -3561 1.2 JUND FOS FOSL2 JUN FOSL1 KLF17 ZNF384 ATF3 ZNF362 SP7 MAN2C1 ENSG00000259931 lnc-SIN3A-4 RF00017-1848 PTPN9
GH15J075531 Enhancer 0.9 Ensembl ENCODE 0.4 -19.6 -19560 3.2 CTCF TCF12 JUND REST SMC3 ZNF341 FOXA2 NR2F2 DEK ZBTB17 MAN2C1 ENSG00000260274 PTPN9 SNUPN RF00017-1848 ENSG00000259931 lnc-SIN3A-4 ENSG00000260269
GH15J075509 Enhancer 0.5 ENCODE 0.7 +3.9 3925 0.2 CTCF REST RAD21 SMC3 ZNF335 ZNF654 HNF4A ZNF143 TRIM22 SNUPN ENSG00000259931 lnc-SIN3A-4 piR-56759-188 PTPN9
GH15J075508 Enhancer 0.5 ENCODE 0.7 +4.1 4125 0.2 CTCF SMC3 ZNF654 RAD21 HNF4A TRIM22 SNUPN ENSG00000259931 lnc-SIN3A-4 piR-56759-188 PTPN9
GH15J075538 Enhancer 1 Ensembl ENCODE 0.3 -30.7 -30661 10.2 ZNF10 ZIC2 ZEB1 NCOR1 NFIC ZBTB17 ZNF263 TRIM28 ZFHX2 TAL1 MAN2C1 MIR631 SNUPN ENSG00000260274 SIN3A COMMD4 UBE2Q2 RF00017-1848 ENSG00000259931 lnc-SIN3A-4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259931 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000259931 Gene

Genomic Locations for ENSG00000259931 Gene
chr15:75,512,770-75,513,040
(GRCh38/hg38)
Size:
271 bases
Orientation:
Minus strand
chr15:75,805,111-75,805,381
(GRCh37/hg19)
Size:
271 bases
Orientation:
Minus strand

Genomic View for ENSG00000259931 Gene

Genes around ENSG00000259931 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000259931 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259931 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000259931 Gene

Proteins for ENSG00000259931 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000259931 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259931 Gene

Domains & Families for ENSG00000259931 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259931 Gene

Function for ENSG00000259931 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ENSG00000259931 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259931 Gene

Localization for ENSG00000259931 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259931 Gene

Pathways & Interactions for ENSG00000259931 Gene

PathCards logo

SuperPathways for ENSG00000259931 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000259931 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259931 Gene

Drugs & Compounds for ENSG00000259931 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000259931 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000259931 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259931 Gene

No ASD Table

Relevant External Links for ENSG00000259931 Gene

GeneLoc Exon Structure for
ENSG00000259931

Expression for ENSG00000259931 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000259931 Gene

mRNA expression in normal human tissues for ENSG00000259931 Gene
mRNA expression by GTEx for ENSG00000259931 Gene
genes like me logo Genes that share expression patterns with ENSG00000259931: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259931 Gene

Orthologs for ENSG00000259931 Gene

Evolution for ENSG00000259931 Gene

ENSEMBL:
Gene Tree for ENSG00000259931 (if available)
TreeFam:
Gene Tree for ENSG00000259931 (if available)

No data available for Orthologs for ENSG00000259931 Gene

Paralogs for ENSG00000259931 Gene

No data available for Paralogs for ENSG00000259931 Gene

Variants for ENSG00000259931 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259931 Gene

Disorders for ENSG00000259931 Gene

No disorders were found for ENSG00000259931 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259931 Gene

Publications for ENSG00000259931 Gene

No publications were found for ENSG00000259931 Gene.

No data available for Mastermind for ENSG00000259931 Gene

Products for ENSG00000259931 Gene

Sources for ENSG00000259931 Gene