Aliases for ENSG00000259914 Gene

Data sources for ENSG00000259914 Gene:

Subcategory (RNA class) for ENSG00000259914 Gene

lncRNA

Aliases for ENSG00000259914 Gene

External Ids for ENSG00000259914 Gene

Summaries for ENSG00000259914 Gene

GeneCards Summary for ENSG00000259914 Gene

ENSG00000259914 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000259914 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259914 Gene

Genomics for ENSG00000259914 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000259914 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J083726 Enhancer 0.5 ENCODE 250.7 -1.0 -1008 1.1 GABPA SPI1 POLR2A MAX REST HMBOX1 ENSG00000259914 lnc-HSBP1-3 piR-31917 LOC105371366 ENSG00000260788 HSBP1
GH16J082990 Enhancer 1 FANTOM5 Ensembl ENCODE 10.2 +732.4 732442 6.1 ZNF513 MAFF JUND ZNF316 SPI1 YBX1 MAFK MAFG LARP7 CREB1 ENSG00000259914 CDH13 LOC101928417 piR-50444-157 HSBP1
GH16J084124 Enhancer 0.6 Ensembl 10.2 -398.3 -398324 1 CUX1 NONO HDAC2 FOXP1 LARP7 PKNOX1 TSC22D4 KDM1A BCOR ZBTB2 lnc-MBTPS1-1 TAF1C MBTPS1 HSDL1 DNAAF1 ADAD2 ENSG00000259914 KCNG4 HSALNG0113102
GH16J083721 Enhancer 0.2 Ensembl 0.7 +4.5 4476 0.6 ENSG00000261103 ENSG00000259914 ENSG00000288554 LOC105371366 ENSG00000260788 HSBP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259914 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000259914 Gene

Latest Assembly
chr16:83,725,675-83,726,377
(GRCh38/hg38)
Size:
703 bases
Orientation:
Minus strand

Previous Assembly
chr16:83,759,281-83,759,982
(GRCh37/hg19 by Ensembl)
Size:
702 bases
Orientation:
Minus strand

Genomic View for ENSG00000259914 Gene

Genes around ENSG00000259914 on UCSC Golden Path with GeneCards custom track
ENSG00000259914 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000259914 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259914 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259914 Gene

Proteins for ENSG00000259914 Gene

Post-translational modifications for ENSG00000259914 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259914 Gene

Domains & Families for ENSG00000259914 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259914 Gene

Function for ENSG00000259914 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259914 Gene

Localization for ENSG00000259914 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259914 Gene

Pathways & Interactions for ENSG00000259914 Gene

PathCards logo

SuperPathways for ENSG00000259914 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000259914 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259914 Gene

Drugs & Compounds for ENSG00000259914 Gene

No Compound Related Data Available

Transcripts for ENSG00000259914 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000259914 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000328C98_9606 lncRNA 703 3

Ensembl: ENST00000563342 (view in UCSC) ,

LNCipedia: lnc-SLC38A8-3:1,

NONCODE: NONHSAT144007.2,

URS0001BCCE1A_9606 lncRNA 702 1

LncBook: HSALNT0234398,

ENSG00000259914 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259914 Gene

No ASD Table

Relevant External Links for ENSG00000259914 Gene

GeneLoc Exon Structure for
ENSG00000259914

No data available for mRNA/cDNA for ENSG00000259914 Gene

Expression for ENSG00000259914 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000259914 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000259914 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x10.1), Brain - Substantia nigra (x9.7), Brain - Hippocampus (x6.1), Brain - Caudate (basal ganglia) (x4.7), and Brain - Putamen (basal ganglia) (x4.5).
genes like me logo Genes that share expression patterns with ENSG00000259914: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259914 Gene

Orthologs for ENSG00000259914 Gene

Evolution for ENSG00000259914 Gene

ENSEMBL:
Gene Tree for ENSG00000259914 (if available)
TreeFam:
Gene Tree for ENSG00000259914 (if available)

No data available for Orthologs for ENSG00000259914 Gene

Paralogs for ENSG00000259914 Gene

No data available for Paralogs for ENSG00000259914 Gene

Variants for ENSG00000259914 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259914 Gene

Disorders for ENSG00000259914 Gene

No disorders were found for ENSG00000259914 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259914 Gene

Publications for ENSG00000259914 Gene

No publications were found for ENSG00000259914 Gene.

No data available for Mastermind for ENSG00000259914 Gene

Products for ENSG00000259914 Gene

Sources for ENSG00000259914 Gene