Aliases for ENSG00000259914 Gene

Subcategory (RNA class) for ENSG00000259914 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000259914 Gene

  • Novel Transcript, Antisense To CDH13 5
  • Lnc-SLC38A8-3 168
  • NONHSAG020130 92
  • AC009063.1 5

External Ids for ENSG00000259914 Gene

Summaries for ENSG00000259914 Gene

GeneCards Summary for ENSG00000259914 Gene

ENSG00000259914 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000259914 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259914 Gene

Genomics for ENSG00000259914 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000259914 Gene

Promoters and enhancers for ENSG00000259914 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J083726 Enhancer 0.5 ENCODE 500.7 -1.0 -1008 1.1 GABPA SPI1 REST POLR2A MAX HMBOX1 ENSG00000259914 lnc-HSBP1-3 piR-31917 LOC105371366 ENSG00000260788
GH16J082994 Enhancer 0.8 FANTOM5 ENCODE 10.2 +730.4 730429 2 JUND FOS TRIM28 TSC22D4 NR2F2 CREB1 ZNF513 GATA2 JUN LARP7 ENSG00000259914 LOC101928417 piR-50444-157 CDH13
GH16J084124 Enhancer 0.6 Ensembl 10.2 -398.3 -398324 1 CUX1 TSC22D4 NONO BCOR HDAC2 ZNF639 FOXP1 LARP7 KDM1A PKNOX1 lnc-MBTPS1-1 TAF1C MBTPS1 HSDL1 DNAAF1 ADAD2 ENSG00000259914 KCNG4 ENSG00000260410
GH16J083717 Enhancer 0.7 Ensembl ENCODE 0.4 +8.4 8360 1.5 CTCF TRIM28 REST ZKSCAN1 FOS RXRA RAD21 JUN ZNF143 ENSG00000261103 ENSG00000259914
GH16J083721 Enhancer 0.2 Ensembl 0.7 +4.5 4476 0.6 ENSG00000261103 ENSG00000259914 LOC105371366 ENSG00000260788
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259914 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000259914 Gene

Genomic Locations for ENSG00000259914 Gene
chr16:83,725,676-83,726,377
(GRCh38/hg38)
Size:
702 bases
Orientation:
Minus strand
chr16:83,759,281-83,759,982
(GRCh37/hg19)
Size:
702 bases
Orientation:
Minus strand

Genomic View for ENSG00000259914 Gene

Genes around ENSG00000259914 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000259914 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259914 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259914 Gene

Proteins for ENSG00000259914 Gene

Post-translational modifications for ENSG00000259914 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259914 Gene

Domains & Families for ENSG00000259914 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259914 Gene

Function for ENSG00000259914 Gene

Phenotypes From GWAS Catalog for ENSG00000259914 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259914 Gene

Localization for ENSG00000259914 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259914 Gene

Pathways & Interactions for ENSG00000259914 Gene

PathCards logo

SuperPathways for ENSG00000259914 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000259914 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259914 Gene

Drugs & Compounds for ENSG00000259914 Gene

No Compound Related Data Available

Transcripts for ENSG00000259914 Gene

mRNA/cDNA for ENSG00000259914 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259914 Gene

No ASD Table

Relevant External Links for ENSG00000259914 Gene

GeneLoc Exon Structure for
ENSG00000259914

Expression for ENSG00000259914 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000259914 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000259914 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x10.1), Brain - Substantia nigra (x9.7), Brain - Hippocampus (x6.1), Brain - Caudate (basal ganglia) (x4.7), and Brain - Putamen (basal ganglia) (x4.5).
genes like me logo Genes that share expression patterns with ENSG00000259914: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259914 Gene

Orthologs for ENSG00000259914 Gene

Evolution for ENSG00000259914 Gene

ENSEMBL:
Gene Tree for ENSG00000259914 (if available)
TreeFam:
Gene Tree for ENSG00000259914 (if available)

No data available for Orthologs for ENSG00000259914 Gene

Paralogs for ENSG00000259914 Gene

No data available for Paralogs for ENSG00000259914 Gene

Variants for ENSG00000259914 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259914 Gene

Disorders for ENSG00000259914 Gene

No disorders were found for ENSG00000259914 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259914 Gene

Publications for ENSG00000259914 Gene

No publications were found for ENSG00000259914 Gene.

No data available for Mastermind for ENSG00000259914 Gene

Products for ENSG00000259914 Gene

Sources for ENSG00000259914 Gene