Aliases for ENSG00000259910 Gene

Subcategory (RNA class) for ENSG00000259910 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000259910 Gene

  • Novel Transcript, Antisense To CACNA1H 5
  • NONHSAG018232 92
  • HSALNG0108856 167
  • Lnc-TPSG1-2 168
  • AC120498.1 5

External Ids for ENSG00000259910 Gene

Previous GeneCards Identifiers for ENSG00000259910 Gene

  • GC16M001215

Summaries for ENSG00000259910 Gene

GeneCards Summary for ENSG00000259910 Gene

ENSG00000259910 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000259910 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259910 Gene

Genomics for ENSG00000259910 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000259910 Gene

Promoters and enhancers for ENSG00000259910 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J001151 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 +3.7 3721 9.9 TCF12 USF1 ZFX ZNF10 ZIC2 ZBTB10 FOXA1 GABPA ZBTB26 ZNF740 CACNA1H ENSG00000260403 TPSB2 FBXL16 5EW4_A-018 ENSG00000259910
GH16J001168 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -9.2 -9217 4.4 ZIC2 RFX1 KLF8 ZFHX2 SAFB SCRT1 HIC1 EZH2 EGR1 GLIS1 TPSB2 NHLRC4 ENSG00000259910 CACNA1H HSALNG0108858
GH16J001162 Enhancer 0.7 Ensembl dbSUPER 0.7 -3.6 -3625 0.8 FOS CTCF FOSL2 FOSL1 ZNF335 KLF17 HIC1 ZNF664 JUND UBTF ENSG00000259910 CACNA1H HSALNG0108858
GH16J001173 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -14.5 -14524 3 TCF12 ZIC2 ZBTB10 TEAD1 BCL11A ZBTB17 ZKSCAN1 CTCF FOSL2 KLF8 TPSG1 TPSD1 TPSAB1 FBXL16 METTL26 ENSG00000259910 HSALNG0108858 CACNA1H
GH16J001179 Enhancer 1.1 ENCODE CraniofacialAtlas dbSUPER 0.4 -21.8 -21771 3.8 TCF12 JUND FOS ZIC2 GABPA RFX1 EP300 SKI CTCF MYC TPSG1 CACNA1H UNKL HSALNG0108858 ENSG00000259910
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259910 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000259910 Gene

Genomic Locations for ENSG00000259910 Gene
chr16:1,159,548-1,160,176
(GRCh38/hg38)
Size:
629 bases
Orientation:
Minus strand
chr16:1,209,548-1,210,176
(GRCh37/hg19)
Size:
629 bases
Orientation:
Minus strand

Genomic View for ENSG00000259910 Gene

Genes around ENSG00000259910 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000259910 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259910 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259910 Gene

Proteins for ENSG00000259910 Gene

Post-translational modifications for ENSG00000259910 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259910 Gene

Domains & Families for ENSG00000259910 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259910 Gene

Function for ENSG00000259910 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259910 Gene

Localization for ENSG00000259910 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259910 Gene

Pathways & Interactions for ENSG00000259910 Gene

PathCards logo

SuperPathways for ENSG00000259910 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000259910 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259910 Gene

Drugs & Compounds for ENSG00000259910 Gene

No Compound Related Data Available

Transcripts for ENSG00000259910 Gene

mRNA/cDNA for ENSG00000259910 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259910 Gene

No ASD Table

Relevant External Links for ENSG00000259910 Gene

GeneLoc Exon Structure for
ENSG00000259910

Expression for ENSG00000259910 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000259910 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000259910 Gene

This gene is overexpressed in Pituitary (x21.6), Thyroid (x11.0), and Heart - Atrial Appendage (x4.2).
genes like me logo Genes that share expression patterns with ENSG00000259910: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259910 Gene

Orthologs for ENSG00000259910 Gene

Evolution for ENSG00000259910 Gene

ENSEMBL:
Gene Tree for ENSG00000259910 (if available)
TreeFam:
Gene Tree for ENSG00000259910 (if available)

No data available for Orthologs for ENSG00000259910 Gene

Paralogs for ENSG00000259910 Gene

No data available for Paralogs for ENSG00000259910 Gene

Variants for ENSG00000259910 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259910 Gene

Disorders for ENSG00000259910 Gene

No disorders were found for ENSG00000259910 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259910 Gene

Publications for ENSG00000259910 Gene

No publications were found for ENSG00000259910 Gene.

No data available for Mastermind for ENSG00000259910 Gene

Products for ENSG00000259910 Gene

Sources for ENSG00000259910 Gene