Aliases for ENSG00000259768 Gene

Subcategory (RNA class) for ENSG00000259768 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000259768 Gene

  • Novel Transcript, Antisense To ZFHX3 5
  • HSALNG0112586 167
  • NONHSAG019942 92
  • Lnc-DHX38-27 168
  • Lnc-DHX38-4 168
  • AC004943.2 5

External Ids for ENSG00000259768 Gene

Previous GeneCards Identifiers for ENSG00000259768 Gene

  • GC16P072779
  • GC16P072699

Summaries for ENSG00000259768 Gene

GeneCards Summary for ENSG00000259768 Gene

ENSG00000259768 is an RNA Gene, and is affiliated with the lncRNA class.

Rfam classification for ENSG00000259768 Gene

Additional gene information for ENSG00000259768 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000259768 Gene

Genomics for ENSG00000259768 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000259768 Gene

Promoters and enhancers for ENSG00000259768 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J072663 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas 500.7 -0.2 -223 3.4 ZBTB40 SIN3A POLR2G SP1 FOS POLR2A ZBTB10 CLOCK ZBTB11 GABPA ENSG00000259768 LINC01572 piR-51907 DHX38 ATXN1L lnc-ZFHX3-4
GH16J072222 Enhancer 0.4 Ensembl 4.8 -442.7 -442722 0.4 RBM25 CHD4 KDM1A PMFBP1 HPR ENSG00000259768 ENSG00000261673 HSALNG0112544
GH16J072677 Enhancer 0.8 ENCODE 0.4 +12.9 12897 1.4 EP300 NCOR1 KDM6A FOXA1 ZBTB25 SKI TEAD1 ATF2 TBX3 CTBP1 RF00066-075 RNU7-90P lnc-ZFHX3-2 ENSG00000259768
GH16J072704 Enhancer 0.8 VISTA UCNEbase 0.3 +40.3 40337 1.6 POLR2A SMARCA4 piR-57387-017 piR-48799-046 ENSG00000259768
GH16J072722 Enhancer 0.9 Ensembl ENCODE 0.2 +57.8 57778 2.6 EP300 TEAD4 ZIC2 HDAC2 CTCF OSR2 SMC3 TCF7L2 MXI1 FOS HPR KRT18P18 piR-35674-199 ENSG00000259768
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259768 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000259768 Gene

Genomic Locations for ENSG00000259768 Gene
chr16:72,665,123-72,822,781
(GRCh38/hg38)
Size:
157,659 bases
Orientation:
Plus strand
chr16:72,699,069-72,821,143
(GRCh37/hg19)
Size:
122,075 bases
Orientation:
Plus strand

Genomic View for ENSG00000259768 Gene

Genes around ENSG00000259768 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000259768 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259768 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259768 Gene

Proteins for ENSG00000259768 Gene

Post-translational modifications for ENSG00000259768 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259768 Gene

Domains & Families for ENSG00000259768 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259768 Gene

Function for ENSG00000259768 Gene

Phenotypes From GWAS Catalog for ENSG00000259768 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259768 Gene

Localization for ENSG00000259768 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259768 Gene

Pathways & Interactions for ENSG00000259768 Gene

PathCards logo

SuperPathways for ENSG00000259768 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000259768 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259768 Gene

Drugs & Compounds for ENSG00000259768 Gene

No Compound Related Data Available

Transcripts for ENSG00000259768 Gene

mRNA/cDNA for ENSG00000259768 Gene

10 RNACentral transcripts :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
2 LncBook transcripts :
6 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259768 Gene

No ASD Table

Relevant External Links for ENSG00000259768 Gene

GeneLoc Exon Structure for
ENSG00000259768

Expression for ENSG00000259768 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000259768 Gene

mRNA expression in normal human tissues for ENSG00000259768 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000259768 Gene

This gene is overexpressed in Testis (x8.0).
genes like me logo Genes that share expression patterns with ENSG00000259768: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259768 Gene

Orthologs for ENSG00000259768 Gene

Evolution for ENSG00000259768 Gene

ENSEMBL:
Gene Tree for ENSG00000259768 (if available)
TreeFam:
Gene Tree for ENSG00000259768 (if available)

No data available for Orthologs for ENSG00000259768 Gene

Paralogs for ENSG00000259768 Gene

No data available for Paralogs for ENSG00000259768 Gene

Variants for ENSG00000259768 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259768 Gene

Disorders for ENSG00000259768 Gene

No disorders were found for ENSG00000259768 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259768 Gene

Publications for ENSG00000259768 Gene

No publications were found for ENSG00000259768 Gene.

No data available for Mastermind for ENSG00000259768 Gene

Products for ENSG00000259768 Gene

Sources for ENSG00000259768 Gene