Aliases for ENSG00000259692 Gene

Subcategory (RNA class) for ENSG00000259692 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000259692 Gene

  • Novel Transcript 5
  • NONHSAG017635.2 91
  • NONHSAG017636.2 91
  • NONHSAG017634.2 91
  • HSALNG0107653 164
  • HSALNG0107664 164
  • Lnc-MEX3B-4 165
  • Lnc-MEX3B-2 165
  • Lnc-MEX3B-3 165
  • AC104041.1 5
  • Lnc-TMC3-2 165

External Ids for ENSG00000259692 Gene

Previous GeneCards Identifiers for ENSG00000259692 Gene

  • GC15M081952

Summaries for ENSG00000259692 Gene

GeneCards Summary for ENSG00000259692 Gene

ENSG00000259692 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000259692 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259692 Gene

Genomics for ENSG00000259692 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000259692 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J082100 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas dbSUPER 5.3 -86.9 -86922 1.4 WT1 EFL1 ENSG00000259692 lnc-SAXO2-2 ENSG00000287872 MEX3B
GH15J081869 Promoter 0.8 Ensembl 4.7 +142.8 142779 1.6 IKZF1 KAT8 POLR2A EGR1 NFRKB YY1 EP400 ARNT TBP ZNF592 ENSG00000259692 piR-51137-045 lnc-SAXO2-3 LOC102724001 MEX3B TMC3
GH15J082057 Enhancer 0.4 ENCODE 4.7 -44.6 -44582 0.6 PRDM1 CTBP1 EZH2 ENSG00000259692 MEX3B LINC01583 EFL1
GH15J081865 Enhancer 0.2 Ensembl 4.3 +147.8 147778 0.4 ENSG00000259692 piR-51137-045 lnc-SAXO2-3 LOC102724001 MEX3B TMC3
GH15J081994 Promoter 0.7 Ensembl 0.4 +18.5 18478 2.2 ZNF341 ZBTB26 ZBTB17 ZFHX2 ZNF335 ZNF507 ZBTB33 KLF1 YY1 piR-33432-208 GOLGA6L9 ENSG00000259692 LOC105370922 LOC102724001 MEX3B TMC3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259692 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000259692 Gene

Genomic Locations for ENSG00000259692 Gene
chr15:81,633,426-82,013,579
(GRCh38/hg38)
Size:
380,154 bases
Orientation:
Minus strand
chr15:81,952,823-82,163,466
(GRCh37/hg19)
Size:
210,644 bases
Orientation:
Minus strand

Genomic View for ENSG00000259692 Gene

Genes around ENSG00000259692 on UCSC Golden Path with GeneCards custom track
ENSG00000259692 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000259692 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259692 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259692 Gene

Proteins for ENSG00000259692 Gene

Post-translational modifications for ENSG00000259692 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259692 Gene

Domains & Families for ENSG00000259692 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259692 Gene

Function for ENSG00000259692 Gene

Phenotypes From GWAS Catalog for ENSG00000259692 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259692 Gene

Localization for ENSG00000259692 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259692 Gene

Pathways & Interactions for ENSG00000259692 Gene

PathCards logo

SuperPathways for ENSG00000259692 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000259692 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259692 Gene

Drugs & Compounds for ENSG00000259692 Gene

No Compound Related Data Available

Transcripts for ENSG00000259692 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000259692 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00003C98B0_9606 lncRNA 566 4

Ensembl: ENST00000560097 (view in UCSC) ,

LncBook: HSALNT0223519,

LNCipedia: lnc-MEX3B-4:1,

NONCODE: NONHSAT047750.2,

URS0000EF3170_9606 lncRNA 2011 1

Ensembl: ENST00000559299 (view in UCSC) ,

URS0000EEEC2A_9606 lncRNA 1799 1

Ensembl: ENST00000668584 (view in UCSC) ,

URS0000EEDFD1_9606 lncRNA 1514 1

Ensembl: ENST00000657769 (view in UCSC) ,

URS0000EF3944_9606 lncRNA 1277 1

Ensembl: ENST00000559428 (view in UCSC) ,

ENSG00000259692 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259692 Gene

No ASD Table

Relevant External Links for ENSG00000259692 Gene

GeneLoc Exon Structure for
ENSG00000259692

No data available for mRNA/cDNA for ENSG00000259692 Gene

Expression for ENSG00000259692 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000259692 Gene

mRNA expression in normal human tissues for ENSG00000259692 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000259692 Gene

This gene is overexpressed in Cervix - Endocervix (x4.8), Thyroid (x4.5), and Bladder (x4.2).
genes like me logo Genes that share expression patterns with ENSG00000259692: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259692 Gene

Orthologs for ENSG00000259692 Gene

Evolution for ENSG00000259692 Gene

ENSEMBL:
Gene Tree for ENSG00000259692 (if available)
TreeFam:
Gene Tree for ENSG00000259692 (if available)

No data available for Orthologs for ENSG00000259692 Gene

Paralogs for ENSG00000259692 Gene

No data available for Paralogs for ENSG00000259692 Gene

Variants for ENSG00000259692 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259692 Gene

Disorders for ENSG00000259692 Gene

No disorders were found for ENSG00000259692 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259692 Gene

Publications for ENSG00000259692 Gene

No publications were found for ENSG00000259692 Gene.

No data available for Mastermind for ENSG00000259692 Gene

Products for ENSG00000259692 Gene

Sources for ENSG00000259692 Gene