Aliases for ENSG00000259604 Gene

Aliases for ENSG00000259604 Gene

  • Novel Transcript 5
  • Lnc-ALDH1A3-1 168
  • NONHSAG018107 92
  • HSALNG0108602 167
  • AC015712.4 5

External Ids for ENSG00000259604 Gene

Summaries for ENSG00000259604 Gene

GeneCards Summary for ENSG00000259604 Gene

ENSG00000259604 is an Uncategorized gene.

Additional gene information for ENSG00000259604 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259604 Gene

Genomics for ENSG00000259604 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000259604 Gene

Promoters and enhancers for ENSG00000259604 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J100860 Promoter/Enhancer 0.9 Ensembl ENCODE 506 +1.0 977 4.6 FOXP2 NFE2L2 CEBPB ENSG00000259604 ENSG00000272639 LRRK1 ALDH1A3 ENSG00000272808 LOC105369201 ENSG00000232386
GH15J100848 Promoter/Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas 6.2 -11.9 -11942 2.2 ZNF217 CTCF NRF1 TCF12 PHF8 KLF4 RFX1 SIN3A MYC MBD2 ENSG00000232386 ENSG00000272808 LOC105369201 ALDH1A3 ENSG00000259604 ENSG00000270127
GH15J100853 Enhancer 0.4 Ensembl CraniofacialAtlas 6.6 -8.0 -8047 0.8 HLF ALDH1A3 ENSG00000259604 ENSG00000272808 ENSG00000232386 LOC105369201
GH15J100873 Enhancer 0.7 ENCODE 0.4 +11.4 11388 0.2 CTCF REST CHD1 RAD21 TRIM22 SMC3 DEK CEBPG CEBPB SPI1 ALDH1A3 ENSG00000259604 ENSG00000272639 ENSG00000272808 LOC105369201
GH15J100856 Enhancer 0.3 CraniofacialAtlas 0.4 -5.1 -5147 0.2 IKZF1 ALDH1A3 ENSG00000232386 ENSG00000259604 ENSG00000272808 LOC105369201
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259604 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000259604 Gene

Genomic Locations for ENSG00000259604 Gene
chr15:100,861,843-100,874,369
(GRCh38/hg38)
Size:
12,527 bases
Orientation:
Plus strand
chr15:101,402,048-101,414,195
(GRCh37/hg19)
Size:
12,148 bases
Orientation:
Plus strand

Genomic View for ENSG00000259604 Gene

Genes around ENSG00000259604 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000259604 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259604 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259604 Gene

Proteins for ENSG00000259604 Gene

Post-translational modifications for ENSG00000259604 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259604 Gene

Domains & Families for ENSG00000259604 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259604 Gene

Function for ENSG00000259604 Gene

Phenotypes From GWAS Catalog for ENSG00000259604 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259604 Gene

Localization for ENSG00000259604 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259604 Gene

Pathways & Interactions for ENSG00000259604 Gene

PathCards logo

SuperPathways for ENSG00000259604 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000259604 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259604 Gene

Drugs & Compounds for ENSG00000259604 Gene

No Compound Related Data Available

Transcripts for ENSG00000259604 Gene

mRNA/cDNA for ENSG00000259604 Gene

1 REFSEQ mRNAs :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
11 RNACentral transcripts :
5 NONCODE transcripts :
3 LncBook transcripts :
10 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259604 Gene

No ASD Table

Relevant External Links for ENSG00000259604 Gene

GeneLoc Exon Structure for
ENSG00000259604

Expression for ENSG00000259604 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000259604 Gene

genes like me logo Genes that share expression patterns with ENSG00000259604: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259604 Gene

Orthologs for ENSG00000259604 Gene

Evolution for ENSG00000259604 Gene

ENSEMBL:
Gene Tree for ENSG00000259604 (if available)
TreeFam:
Gene Tree for ENSG00000259604 (if available)

No data available for Orthologs for ENSG00000259604 Gene

Paralogs for ENSG00000259604 Gene

No data available for Paralogs for ENSG00000259604 Gene

Variants for ENSG00000259604 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259604 Gene

Disorders for ENSG00000259604 Gene

No disorders were found for ENSG00000259604 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259604 Gene

Publications for ENSG00000259604 Gene

No publications were found for ENSG00000259604 Gene.

No data available for Mastermind for ENSG00000259604 Gene

Products for ENSG00000259604 Gene

Sources for ENSG00000259604 Gene