Aliases for ENSG00000259598 Gene

Subcategory (RNA class) for ENSG00000259598 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000259598 Gene

  • Novel Transcript, Antisense To RASGRP1 5
  • HSALNG0105126 167
  • NONHSAG016547 92
  • Lnc-FAM98B-2 168
  • AC116158.2 5

External Ids for ENSG00000259598 Gene

Previous GeneCards Identifiers for ENSG00000259598 Gene

  • GC15P038816

Summaries for ENSG00000259598 Gene

GeneCards Summary for ENSG00000259598 Gene

ENSG00000259598 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000259598 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259598 Gene

Genomics for ENSG00000259598 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000259598 Gene

Promoters and enhancers for ENSG00000259598 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J038523 Enhancer 0.6 Ensembl dbSUPER 500.7 -1.0 -969 1.8 BATF IRF4 EBF1 BHLHE40 IKZF1 ENSG00000259598 RASGRP1 FAM98B LINC02694 ENSG00000259326
GH15J038522 Enhancer 0.4 FANTOM5 dbSUPER 500.7 -1.9 -1906 0 ENSG00000259598 RASGRP1 FAM98B LINC02694 ENSG00000259326
GH15J038531 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +15.1 15130 18.8 NRF1 JUND ZBTB11 REST MYC ATF2 TAF9B CTCF ZNF316 ZNF263 RASGRP1 LINC02694 FAM98B RF00019-050 ENSG00000259598
GH15J038529 Enhancer 0.6 Ensembl 0.7 +4.6 4631 1 FOSL1 EHMT2 FOS JUND ATF4 GATA2 DPF2 GATA3 JUN ATF3 RASGRP1 LINC02694 ENSG00000259598 RF00019-050
GH15J038514 Enhancer 0.6 Ensembl dbSUPER 0.4 -9.0 -8969 1 GATA3 EBF1 RCOR1 GATA2 RASGRP1 FAM98B ENSG00000259598 ENSG00000259326 LOC105370774
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259598 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000259598 Gene

Genomic Locations for ENSG00000259598 Gene
chr15:38,524,070-38,534,655
(GRCh38/hg38)
Size:
10,586 bases
Orientation:
Plus strand
chr15:38,816,271-38,826,856
(GRCh37/hg19)
Size:
10,586 bases
Orientation:
Plus strand

Genomic View for ENSG00000259598 Gene

Genes around ENSG00000259598 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000259598 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259598 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259598 Gene

Proteins for ENSG00000259598 Gene

Post-translational modifications for ENSG00000259598 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259598 Gene

Domains & Families for ENSG00000259598 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259598 Gene

Function for ENSG00000259598 Gene

Phenotypes From GWAS Catalog for ENSG00000259598 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259598 Gene

Localization for ENSG00000259598 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259598 Gene

Pathways & Interactions for ENSG00000259598 Gene

PathCards logo

SuperPathways for ENSG00000259598 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000259598 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259598 Gene

Drugs & Compounds for ENSG00000259598 Gene

No Compound Related Data Available

Transcripts for ENSG00000259598 Gene

mRNA/cDNA for ENSG00000259598 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
2 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259598 Gene

No ASD Table

Relevant External Links for ENSG00000259598 Gene

GeneLoc Exon Structure for
ENSG00000259598

Expression for ENSG00000259598 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000259598 Gene

genes like me logo Genes that share expression patterns with ENSG00000259598: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259598 Gene

Orthologs for ENSG00000259598 Gene

Evolution for ENSG00000259598 Gene

ENSEMBL:
Gene Tree for ENSG00000259598 (if available)
TreeFam:
Gene Tree for ENSG00000259598 (if available)

No data available for Orthologs for ENSG00000259598 Gene

Paralogs for ENSG00000259598 Gene

No data available for Paralogs for ENSG00000259598 Gene

Variants for ENSG00000259598 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259598 Gene

Disorders for ENSG00000259598 Gene

No disorders were found for ENSG00000259598 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259598 Gene

Publications for ENSG00000259598 Gene

No publications were found for ENSG00000259598 Gene.

No data available for Mastermind for ENSG00000259598 Gene

Products for ENSG00000259598 Gene

Sources for ENSG00000259598 Gene