Aliases for ENSG00000259523 Gene

Data sources for ENSG00000259523 Gene:

Subcategory (RNA class) for ENSG00000259523 Gene

lncRNA

Aliases for ENSG00000259523 Gene

External Ids for ENSG00000259523 Gene

Previous GeneCards Identifiers for ENSG00000259523 Gene

  • GC15P030115

Summaries for ENSG00000259523 Gene

GeneCards Summary for ENSG00000259523 Gene

ENSG00000259523 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000259523 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259523 Gene

Genomics for ENSG00000259523 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000259523 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J029819 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 250.7 -0.9 -930 5 ZSCAN16 TBP ZBTB10 MXD4 MNT SMAD5 IRF2 MBD2 ZNF217 BHLHE40 ENSG00000259523 TJP1 NSMCE3 HSALNG0104735 piR-61945-152 lnc-FAM189A1-8 FAM189A1
GH15J029949 Enhancer 0.7 dbSUPER 4.8 +129.5 129452 4.7 FEZF1 ZIC2 ZNF843 BCL11B PRDM6 ZNF2 YBX1 INSM2 ZNF24 ZBTB48 ENSG00000229389 ENSG00000259523 lnc-FAM189A1-8 piR-36365-002 TJP1 FAM189A1
GH15J029958 Enhancer 0.2 dbSUPER 4.7 +137.0 137036 2.9 ENSG00000229389 TJP1 ENSG00000259523 lnc-FAM189A1-8 FAM189A1
GH15J029825 Enhancer 0.7 Ensembl 0.7 +3.7 3670 2.6 HES1 GABPA GTF2E2 RUNX1 SKIL CBFB SMARCA4 HDAC2 POLR2A ESRRA NSMCE3 ENSG00000259523 HSALNG0104735 piR-50437-200 lnc-FAM189A1-8 TJP1 FAM189A1
GH15J029811 Enhancer 1 Ensembl ENCODE 0.4 -8.5 -8529 5 FEZF1 MNT ZNF217 BHLHE40 CUX1 SAP130 TAF9B CTBP1 SIN3A ZFP91 APBA2 ENSG00000259523 piR-61945-152 FAM189A1 lnc-FAM189A1-8 TJP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259523 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000259523 Gene

Latest Assembly
chr15:29,822,630-29,825,653
(GRCh38/hg38)
Size:
3,024 bases
Orientation:
Plus strand

Previous Assembly
chr15:30,114,834-30,116,284
(GRCh37/hg19 by Ensembl)
Size:
1,451 bases
Orientation:
Plus strand

Genomic View for ENSG00000259523 Gene

Genes around ENSG00000259523 on UCSC Golden Path with GeneCards custom track
ENSG00000259523 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000259523 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259523 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259523 Gene

Proteins for ENSG00000259523 Gene

Post-translational modifications for ENSG00000259523 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259523 Gene

Domains & Families for ENSG00000259523 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259523 Gene

Function for ENSG00000259523 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259523 Gene

Localization for ENSG00000259523 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259523 Gene

Pathways & Interactions for ENSG00000259523 Gene

PathCards logo

SuperPathways for ENSG00000259523 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000259523 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259523 Gene

Drugs & Compounds for ENSG00000259523 Gene

No Compound Related Data Available

Transcripts for ENSG00000259523 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000259523 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000058EAF9_9606 lncRNA 1451 3

Ensembl: ENST00000557989 (view in UCSC) ,

LNCipedia: lnc-GOLGA8J-5:1, lnc-GOLGA8J-5:2,

NONCODE: NONHSAT041308.2,

URS00008B2507_9606 lncRNA 417 2

LNCipedia: lnc-GOLGA8J-5:3,

NONCODE: NONHSAT041309.2,

ENSG00000259523 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259523 Gene

No ASD Table

Relevant External Links for ENSG00000259523 Gene

GeneLoc Exon Structure for
ENSG00000259523

No data available for mRNA/cDNA for ENSG00000259523 Gene

Expression for ENSG00000259523 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000259523 Gene

genes like me logo Genes that share expression patterns with ENSG00000259523: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259523 Gene

Orthologs for ENSG00000259523 Gene

Evolution for ENSG00000259523 Gene

ENSEMBL:
Gene Tree for ENSG00000259523 (if available)
TreeFam:
Gene Tree for ENSG00000259523 (if available)

No data available for Orthologs for ENSG00000259523 Gene

Paralogs for ENSG00000259523 Gene

No data available for Paralogs for ENSG00000259523 Gene

Variants for ENSG00000259523 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259523 Gene

Disorders for ENSG00000259523 Gene

No disorders were found for ENSG00000259523 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259523 Gene

Publications for ENSG00000259523 Gene

No publications were found for ENSG00000259523 Gene.

No data available for Mastermind for ENSG00000259523 Gene

Products for ENSG00000259523 Gene

Sources for ENSG00000259523 Gene