ENSG00000259476 Gene (RNA Gene)

 

GC15P058522
GIFtS:
6

Aliases for ENSG00000259476 Gene

Subcategory (RNA class) for ENSG00000259476 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000259476 Gene

  • Novel Transcript, Sense Intronic To LIPC 5
  • NONHSAG017021 92
  • HSALNG0106235 167
  • Lnc-MINDY2-2 168
  • AC018904.2 5

External Ids for ENSG00000259476 Gene

Previous GeneCards Identifiers for ENSG00000259476 Gene

  • GC15P058814

Summaries for ENSG00000259476 Gene

GeneCards Summary for ENSG00000259476 Gene

ENSG00000259476 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000259476 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259476 Gene

Genomics for ENSG00000259476 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000259476 Gene

Promoters and enhancers for ENSG00000259476 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH15J058515 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 500.7 +0.8 790 14.2 ZNF217 EP300 TCF12 NCOR1 GTF2E2 JUND FOS ZBTB5 ZBTB11 AFF1 ENSG00000259476 lnc-ALDH1A2-10 SLTM AQP9 ADAM10 LIPC SNORD3P1 ENSG00000245975 MINDY2 ENSG00000225798
GH15J058510 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -8.9 -8921 4.6 EP300 NFIC PBX2 GATA3 FOS ZNF843 FEZF1 MITF TOE1 MEIS2 LIPC ADAM10 SLTM ENSG00000225798 FAM81A ENSG00000259476 LIPC-AS1
GH15J058504 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -14.8 -14811 4.2 CTBP1 NFIC CTCF CEBPG CEBPB FOSL1 EHMT2 IKZF1 USF2 HNF4A LIPC ADAM10 MYZAP FAM81A LIPC-AS1 ENSG00000259476
GH15J058498 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -22.0 -22003 2.2 ZSCAN5C FOS NR3C1 MAFK CTCF VEZF1 GLIS1 ATF2 HNF4A BHLHE40 ALDH1A2 LIPC-AS1 lnc-ALDH1A2-9 ADAM10 LIPC ENSG00000259476
GH15J058501 Enhancer 0.6 ENCODE dbSUPER 0.4 -19.4 -19434 0.2 ZFHX2 GATA3 EGR2 LIPC-AS1 ENSG00000259476 LIPC
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259476 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000259476 Gene

Genomic Locations for ENSG00000259476 Gene
chr15:58,521,311-58,523,371
(GRCh38/hg38)
Size:
2,061 bases
Orientation:
Plus strand
chr15:58,813,510-58,815,570
(GRCh37/hg19)
Size:
2,061 bases
Orientation:
Plus strand

Genomic View for ENSG00000259476 Gene

Genes around ENSG00000259476 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000259476 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259476 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000259476 Gene

Proteins for ENSG00000259476 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000259476 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259476 Gene

Domains & Families for ENSG00000259476 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259476 Gene

Function for ENSG00000259476 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259476 Gene

Localization for ENSG00000259476 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259476 Gene

Pathways & Interactions for ENSG00000259476 Gene

PathCards logo

SuperPathways for ENSG00000259476 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000259476 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259476 Gene

Drugs & Compounds for ENSG00000259476 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000259476 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000259476 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259476 Gene

No ASD Table

Relevant External Links for ENSG00000259476 Gene

GeneLoc Exon Structure for
ENSG00000259476

Expression for ENSG00000259476 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259476 Gene

Orthologs for ENSG00000259476 Gene

Evolution for ENSG00000259476 Gene

ENSEMBL:
Gene Tree for ENSG00000259476 (if available)
TreeFam:
Gene Tree for ENSG00000259476 (if available)

No data available for Orthologs for ENSG00000259476 Gene

Paralogs for ENSG00000259476 Gene

No data available for Paralogs for ENSG00000259476 Gene

Variants for ENSG00000259476 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259476 Gene

Disorders for ENSG00000259476 Gene

No disorders were found for ENSG00000259476 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259476 Gene

Publications for ENSG00000259476 Gene

No publications were found for ENSG00000259476 Gene.

No data available for Mastermind for ENSG00000259476 Gene

Products for ENSG00000259476 Gene

Sources for ENSG00000259476 Gene