Aliases for ENSG00000259447 Gene

Data sources for ENSG00000259447 Gene:

RNA type for ENSG00000259447 Gene

lncRNA

Aliases for ENSG00000259447 Gene

External Ids for ENSG00000259447 Gene

Previous GeneCards Identifiers for ENSG00000259447 Gene

  • GC15M039592

Summaries for ENSG00000259447 Gene

GeneCards Summary for ENSG00000259447 Gene

ENSG00000259447 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000259447 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259447 Gene

Genomics for ENSG00000259447 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000259447 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J039310 Enhancer 0.5 Ensembl 250.7 +0.1 63 0.7 CEBPB EP300 ATF4 HLF ATF7 CEBPG ENSG00000259447 THBS1 HSALNG0105152 HSALNG0105141-002 ENSG00000259345 RASGRP1
GH15J039312 Enhancer 0.8 Ensembl ENCODE 0.7 -2.6 -2602 1.6 HOMEZ CTCF ELF1 SAP130 RAD21 SMC3 ETV4 GABPB1 TEAD3 SPI1 THBS1 FSIP1 ENSG00000259447 piR-48759-096 HSALNG0105141-002 ENSG00000259345 RASGRP1
GH15J039297 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +9.0 9017 8.1 JUND BRCA1 YY1 CEBPB EP300 RXRA SMARCE1 PKNOX1 MAFK RAD21 THBS1 ENSG00000259447 HSALNG0105152 HSALNG0105141-002 ENSG00000259345 RASGRP1
GH15J039316 Enhancer 0.4 ENCODE dbSUPER 0.4 -6.6 -6628 1 BHLHE40 THBS1 SRP14-AS1 piR-48759-096 ENSG00000259447 HSALNG0105141-002 ENSG00000259345 RASGRP1
GH15J039314 Enhancer 0.2 dbSUPER 0.7 -4.4 -4364 0.9 THBS1 ENSG00000259447 piR-48759-096 HSALNG0105141-002 ENSG00000259345 RASGRP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259447 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000259447 Gene

Latest Assembly
chr15:39,300,417-39,310,818
(GRCh38/hg38)
Size:
10,402 bases
Orientation:
Minus strand

Previous Assembly
chr15:39,592,619-39,602,983
(GRCh37/hg19 by Ensembl)
Size:
10,365 bases
Orientation:
Minus strand

Genomic View for ENSG00000259447 Gene

Genes around ENSG00000259447 on UCSC Golden Path with GeneCards custom track
ENSG00000259447 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000259447 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259447 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259447 Gene

Proteins for ENSG00000259447 Gene

Post-translational modifications for ENSG00000259447 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259447 Gene

Domains & Families for ENSG00000259447 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259447 Gene

Function for ENSG00000259447 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259447 Gene

Localization for ENSG00000259447 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259447 Gene

Pathways & Interactions for ENSG00000259447 Gene

PathCards logo

SuperPathways for ENSG00000259447 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000259447 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259447 Gene

Drugs & Compounds for ENSG00000259447 Gene

No Compound Related Data Available

Transcripts for ENSG00000259447 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000259447 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000019FB8_9606 lncRNA 913 4

Ensembl: ENST00000558948 (view in UCSC) ,

LncBook: HSALNT0218819,

LNCipedia: lnc-FSIP1-6:4,

NONCODE: NONHSAT041740.2,

URS000021D9BC_9606 lncRNA 345 3

Ensembl: ENST00000558245 (view in UCSC) ,

LNCipedia: lnc-FSIP1-6:3,

NONCODE: NONHSAT041737.2,

URS00008BFB81_9606 lncRNA 319 3

LncBook: HSALNT0218816,

LNCipedia: lnc-FSIP1-6:2,

NONCODE: NONHSAT041738.2,

URS00008BD128_9606 lncRNA 241 3

LncBook: HSALNT0218818,

LNCipedia: lnc-FSIP1-6:1,

NONCODE: NONHSAT041739.2,

URS00009C1721_9606 lncRNA 395 2

LncBook: HSALNT0218815,

NONCODE: NONHSAT171483.1,

ENSG00000259447 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259447 Gene

No ASD Table

Relevant External Links for ENSG00000259447 Gene

GeneLoc Exon Structure for
ENSG00000259447

No data available for mRNA/cDNA for ENSG00000259447 Gene

Expression for ENSG00000259447 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000259447 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000259447 Gene

This gene is overexpressed in Testis (x48.5).
genes like me logo Genes that share expression patterns with ENSG00000259447: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259447 Gene

Orthologs for ENSG00000259447 Gene

Evolution for ENSG00000259447 Gene

ENSEMBL:
Gene Tree for ENSG00000259447 (if available)
TreeFam:
Gene Tree for ENSG00000259447 (if available)

No data available for Orthologs for ENSG00000259447 Gene

Paralogs for ENSG00000259447 Gene

No data available for Paralogs for ENSG00000259447 Gene

Variants for ENSG00000259447 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259447 Gene

Disorders for ENSG00000259447 Gene

Additional Disease Information for ENSG00000259447

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000259447 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000259447 Gene

Publications for ENSG00000259447 Gene

No publications were found for ENSG00000259447 Gene.

No data available for Mastermind for ENSG00000259447 Gene

Products for ENSG00000259447 Gene

Sources for ENSG00000259447 Gene