Aliases for ENSG00000259415 Gene

Subcategory (RNA class) for ENSG00000259415 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000259415 Gene

  • Novel Transcript 5
  • HSALNG0107825 167
  • NONHSAG017738 92
  • Lnc-ALPK3-1 168
  • AC012291.2 5

External Ids for ENSG00000259415 Gene

Previous GeneCards Identifiers for ENSG00000259415 Gene

  • GC15P085296

Summaries for ENSG00000259415 Gene

GeneCards Summary for ENSG00000259415 Gene

ENSG00000259415 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000259415 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259415 Gene

Genomics for ENSG00000259415 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000259415 Gene

Promoters and enhancers for ENSG00000259415 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J084753 Enhancer 1 ENCODE dbSUPER 500.7 +1.0 973 1 ZSCAN5C TCF12 ZNF10 ZIC2 TCF7 ATF2 ZKSCAN8 FOXA2 OSR2 WT1 ENSG00000259415 ALPK3 ENSG00000259683 ZNF592 piR-43106-082
GH15J084752 Enhancer 0.8 ENCODE dbSUPER 500.7 -0.2 -215 1.1 ZBTB25 ZKSCAN8 FOXA2 ZFP36 MIER3 CREM ZGPAT ZNF3 RXRA HMG20A ENSG00000259415 NMB RF00017-1879 ZNF592
GH15J084755 Enhancer 0.6 dbSUPER 0.7 +3.0 3031 2.2 FOXA2 CTCF SCRT1 RAD21 RXRA HNF4A REST ZNF362 SP1 ZNF770 NMB ZNF592 RN7SL331P ENSG00000259683 ENSG00000259415 piR-43106-082
GH15J084761 Enhancer 0.8 ENCODE dbSUPER 0.4 +8.6 8579 0.9 MXI1 POLR2A FOSL1 FOS EBF1 PRDM6 SMARCA4 ZFP37 JUNB ATF3 NMB WDR73 ENSG00000259415 piR-43106-082 ZNF592
GH15J084766 Enhancer 0.6 ENCODE dbSUPER 0.4 +13.7 13659 0.2 ZNF366 MAX ZSCAN4 PRDM1 ZKSCAN1 ALPK3 SEC11A NMB WDR73 ENSG00000200991 piR-43106-082 ENSG00000259415 ZNF592
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259415 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000259415 Gene

Genomic Locations for ENSG00000259415 Gene
chr15:84,753,122-84,754,502
(GRCh38/hg38)
Size:
1,381 bases
Orientation:
Plus strand
chr15:85,296,353-85,297,733
(GRCh37/hg19)
Size:
1,381 bases
Orientation:
Plus strand

Genomic View for ENSG00000259415 Gene

Genes around ENSG00000259415 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000259415 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259415 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259415 Gene

Proteins for ENSG00000259415 Gene

Post-translational modifications for ENSG00000259415 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259415 Gene

Domains & Families for ENSG00000259415 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259415 Gene

Function for ENSG00000259415 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259415 Gene

Localization for ENSG00000259415 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259415 Gene

Pathways & Interactions for ENSG00000259415 Gene

PathCards logo

SuperPathways for ENSG00000259415 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000259415 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259415 Gene

Drugs & Compounds for ENSG00000259415 Gene

No Compound Related Data Available

Transcripts for ENSG00000259415 Gene

mRNA/cDNA for ENSG00000259415 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259415 Gene

No ASD Table

Relevant External Links for ENSG00000259415 Gene

GeneLoc Exon Structure for
ENSG00000259415

Expression for ENSG00000259415 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000259415 Gene

genes like me logo Genes that share expression patterns with ENSG00000259415: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259415 Gene

Orthologs for ENSG00000259415 Gene

Evolution for ENSG00000259415 Gene

ENSEMBL:
Gene Tree for ENSG00000259415 (if available)
TreeFam:
Gene Tree for ENSG00000259415 (if available)

No data available for Orthologs for ENSG00000259415 Gene

Paralogs for ENSG00000259415 Gene

No data available for Paralogs for ENSG00000259415 Gene

Variants for ENSG00000259415 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259415 Gene

Disorders for ENSG00000259415 Gene

No disorders were found for ENSG00000259415 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259415 Gene

Publications for ENSG00000259415 Gene

No publications were found for ENSG00000259415 Gene.

No data available for Mastermind for ENSG00000259415 Gene

Products for ENSG00000259415 Gene

Sources for ENSG00000259415 Gene