Aliases for ENSG00000259393 Gene

Aliases for ENSG00000259393 Gene

  • Ribosome Binding Factor A (Putative) (RBFA) Pseudogene 5
  • AC025918.2 5

External Ids for ENSG00000259393 Gene

Summaries for ENSG00000259393 Gene

GeneCards Summary for ENSG00000259393 Gene

ENSG00000259393 is a Pseudogene.

Additional gene information for ENSG00000259393 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259393 Gene

Genomics for ENSG00000259393 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000259393 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J058966 Enhancer 0.3 Ensembl 600.7 +0.8 807 0.8 JUND ENSG00000259393 LOC100420929 lnc-SLTM-4 FJ601666-029 SLTM RNF111 lnc-SLTM-2 CCNB2
GH15J058986 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 -20.4 -20393 4 LEF1 POLR2A BACH1 PRDM1 RBFOX2 RXRB PATZ1 REST BRD9 ZNF501 RNF111 MYO1E lnc-SLTM-4 ENSG00000259393 piR-56341-059 SLTM lnc-SLTM-2 CCNB2
GH15J058978 Enhancer 0.8 ENCODE 0.4 -11.9 -11867 1.5 CTCF RELA REST RAD21 TCF12 IKZF2 YY1 PKNOX1 EED ARID3A RNF111 ADAM10 ENSG00000259393 lnc-SLTM-4 piR-56341-059 SLTM lnc-SLTM-2 CCNB2
GH15J059012 Promoter/Enhancer 1.1 EPDnew Ensembl ENCODE 0.3 -43.0 -42993 2.4 RUNX3 FOXM1 TAL1 TCF12 MEIS2 CEBPB ATF7 CBFA2T3 ARID1B SMARCA4 RNF111 MINDY2 piR-56341-059 lnc-SLTM-4 ENSG00000259393 SLTM CCNB2 lnc-SLTM-2
GH15J059002 Enhancer 0.8 Ensembl ENCODE 0.3 -32.9 -32892 12.2 PKNOX1 EED MNT RUNX3 ZNF316 MAFF MAFK MAFG BCL11A NBN MINDY2 ADAM10 piR-56341-059 ENSG00000259393 lnc-SLTM-4 SLTM lnc-SLTM-2 CCNB2 RNF111
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259393 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000259393 Gene

Genomic Locations for ENSG00000259393 Gene
chr15:58,967,046-58,967,808
(GRCh38/hg38)
Size:
763 bases
Orientation:
Minus strand

Genomic View for ENSG00000259393 Gene

Genes around ENSG00000259393 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000259393 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259393 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259393 Gene

Proteins for ENSG00000259393 Gene

Post-translational modifications for ENSG00000259393 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259393 Gene

Domains & Families for ENSG00000259393 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259393 Gene

Function for ENSG00000259393 Gene

Phenotypes From GWAS Catalog for ENSG00000259393 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259393 Gene

Localization for ENSG00000259393 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259393 Gene

Pathways & Interactions for ENSG00000259393 Gene

PathCards logo

SuperPathways for ENSG00000259393 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000259393 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259393 Gene

Drugs & Compounds for ENSG00000259393 Gene

No Compound Related Data Available

Transcripts for ENSG00000259393 Gene

mRNA/cDNA for ENSG00000259393 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259393 Gene

No ASD Table

Relevant External Links for ENSG00000259393 Gene

GeneLoc Exon Structure for
ENSG00000259393

Expression for ENSG00000259393 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259393 Gene

Orthologs for ENSG00000259393 Gene

Evolution for ENSG00000259393 Gene

ENSEMBL:
Gene Tree for ENSG00000259393 (if available)
TreeFam:
Gene Tree for ENSG00000259393 (if available)

No data available for Orthologs for ENSG00000259393 Gene

Paralogs for ENSG00000259393 Gene

No data available for Paralogs for ENSG00000259393 Gene

Variants for ENSG00000259393 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259393 Gene

Disorders for ENSG00000259393 Gene

No disorders were found for ENSG00000259393 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259393 Gene

Publications for ENSG00000259393 Gene

No publications were found for ENSG00000259393 Gene.

No data available for Mastermind for ENSG00000259393 Gene

Products for ENSG00000259393 Gene

Sources for ENSG00000259393 Gene