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Aliases for ENSG00000259277 Gene
Subcategory (RNA class) for ENSG00000259277 Gene
lncRNA
Quality Score for this RNA gene is
14
Aliases for ENSG00000259277 Gene
External Ids for ENSG00000259277 Gene
- Ensembl: ENSG00000259277
Previous GeneCards Identifiers for ENSG00000259277 Gene
- GC15M029262
Summaries for ENSG00000259277 Gene
GeneCards Summary for ENSG00000259277 Gene
ENSG00000259277 is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for ENSG00000259277 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259277 Gene
Genomics for ENSG00000259277 Gene
GeneHancer (GH) Regulatory Elements for ENSG00000259277 Gene
Promoters and enhancers for ENSG00000259277 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH15J028976 | Enhancer | 1.1 | Ensembl ENCODE CraniofacialAtlas dbSUPER | 750.6 | -0.9 | -937 | 3.6 | SIN3A MNT ELF1 FOSL2 POLR2A REST SP1 FOS FOSL1 RFX5 | ENSG00000259277 APBA2 piR-60357 | |
| GH15J028975 | Enhancer | 0.9 | Ensembl ENCODE dbSUPER | 750.6 | +1.6 | 1563 | 0.6 | CTCF CC2D1A RAD21 REST ZSCAN29 MNT CEBPG ZNF143 KLF16 ZNF2 | ENSG00000259277 APBA2 RF00998-048 | |
| GH15J028983 | Enhancer | 1.3 | FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER | 0.4 | -7.8 | -7756 | 2.4 | ZNF133 CREB1 ZIC2 ZNF629 POLR2A SP2 ATF2 ZNF398 | APBA2 HERC2 NSMCE3 HERC2P9 ENSG00000259277 piR-60357 | |
| GH15J028967 | Enhancer | 1.2 | Ensembl ENCODE dbSUPER | 0.4 | +8.4 | 8396 | 2.3 | SMARCE1 ELF1 L3MBTL2 TEAD4 ZKSCAN8 ZNF148 ZFX MLLT1 BACH1 SMARCA4 | APBA2 RF00998-048 ENSG00000259277 | |
| GH15J028974 | Enhancer | 0.6 | Ensembl ENCODE dbSUPER | 0.6 | +3.2 | 3163 | 2.2 | CTCF | APBA2 ENSG00000259277 RF00998-048 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around ENSG00000259277 on UCSC Golden Path with GeneCards custom track
Genomic Locations for ENSG00000259277 Gene
Genomic Locations for ENSG00000259277 Gene
- chr15:28,970,196-28,977,464
- (GRCh38/hg38)
- Size:
- 7,269 bases
- Orientation:
- Minus strand
- chr15:29,262,399-29,269,667
- (GRCh37/hg19)
- Size:
- 7,269 bases
- Orientation:
- Minus strand
Genomic View for ENSG00000259277 Gene
Genes around ENSG00000259277 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 15q13.1 by Ensembl
ENSG00000259277 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
No data available for RefSeq DNA sequence for ENSG00000259277 Gene
Proteins for ENSG00000259277 Gene
Post-translational modifications for ENSG00000259277 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ENSG00000259277
- Origene Custom Protein Services for ENSG00000259277
No data available for DME Specific Peptides for ENSG00000259277 Gene
Domains & Families for ENSG00000259277 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259277 Gene
Function for ENSG00000259277 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259277 Gene
Localization for ENSG00000259277 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259277 Gene
Transcripts for ENSG00000259277 Gene
mRNA/cDNA for ENSG00000259277 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000560531 751 bps (ENST00000560531.1)
- (1) RNACentral transcripts :
- (1) NONCODE transcripts :
- (1) LNCipedia transcripts :
- (1) LncBook transcripts :
CRISPR Products
- Browse CRISPR knockouts for ENSG00000259277
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for ENSG00000259277 Gene
- GeneLoc Exon Structure for
- ENSG00000259277
Expression for ENSG00000259277 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259277 Gene
Orthologs for ENSG00000259277 Gene
No data available for Orthologs for ENSG00000259277 Gene
Paralogs for ENSG00000259277 Gene
No data available for Paralogs for ENSG00000259277 Gene
Variants for ENSG00000259277 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259277 Gene
Disorders for ENSG00000259277 Gene
No disorders were found for ENSG00000259277 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259277 Gene
Publications for ENSG00000259277 Gene
No publications were found for ENSG00000259277 Gene.
No data available for External Links for ENSG00000259277 Gene
Products for ENSG00000259277 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ENSG00000259277
- Origene Custom Protein Services for ENSG00000259277
- Browse OriGene Inhibitory RNA Products For ENSG00000259277
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for ENSG00000259277
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For ENSG00000259277
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for ENSG00000259277
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for ENSG00000259277
- Search GeneCopoeia for miRNA 3'UTR Target clone products for ENSG00000259277
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for ENSG00000259277
Sources for ENSG00000259277 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) CGAP SAGE
- (31) SOURCE
- (32) HomoloGene
- (33) PanEnsembl
- (34) euGenes
- (35) SGD
- (36) FlyBase
- (37) WormBase
- (38) Pseudogene
- (39) DGV
- (40) dbSNP
- (41) GenAtlas
- (42) HGMD
- (43) GAD
- (44) BGMUT
- (45) HuGE
- (46) Atlas
- (47) GenBank
- (48) H-invDB
- (49) HORDE
- (50) HUGE
- (51) IMGT
- (52) Leiden
- (53) miRBase
- (54) DME
- (55) OriGene
- (56) PubMed
- (57) R&D Systems
- (58) TGDB
- (59) Tocris
- (60) Abcam
- (61) Novus Biologicals
- (62) ProSpec
- (63) Sino Biological
- (64) GenScript
- (65) Qiagen
- (66) OCA
- (67) Proteopedia
- (68) MOPED
- (69) neXtProt
- (70) Reactome
- (71) GeneGo (Thomson Reuters)
- (72) DISEASES
- (73) SIMAP
- (74) GenomeRNAi
- (75) LifeMap
- (76) miRTarBase
- (77) MalaCards
- (78) Invitrogen
- (79) BitterDB
- (80) ESI-BIO
- (81) RefSeq
- (82) BioSystems
- (83) MaxQB
- (84) IUPHAR
- (85) BioGPS
- (86) Illumina
- (87) COMPARTMENTS
- (88) HOMER
- (89) PaxDb
- (90) ApexBio
- (91) Addgene
- (92) antibodies-online
- (93) CYP
- (94) NONCODE
- (95) TreeFam
- (96) PathCards
- (97) GeneReviews
- (98) GeneTex
- (99) Taconic Biosciences
- (100) GTEx
- (101) ProteomicsDB
- (102) SCBT
- (103) DGIdb
- (104) ClinicalTrials
- (105) RVIS
- (106) SIGNOR
- (107) diseasecard
- (108) NIH Rare Diseases
- (109) Orphanet
- (110) UMLS
- (111) GTR
- (112) Disease Ontology
- (113) Genetics Home Reference
- (114) MeSH
- (115) MedlinePlus
- (116) CDC
- (117) NINDS
- (118) NCBI Bookshelf
- (119) ClinVar
- (120) Gene Damage Index
- (121) HPO
- (122) UDN
- (123) VISTA
- (124) FANTOM5
- (125) ENCODE
- (126) ProSci
- (127) Horizon
- (128) NURSA
- (129) IID
- (130) VectorBuilder
- (131) SNPedia
- (132) BRCA Exchange
- (133) CIViC
- (134) ProteoGenix
- (135) dbSUPER
- (136) TISSUES
- (137) Gene ORGANizer
- (138) abm
- (139) Human Protein Atlas
- (140) GWAS Catalog
- (141) Monarch Initiative
- (142) DataMed
- (143) HumanCyc
- (144) genomics-online
- (145) UCNEbase
- (146) EPDnew
- (147) Applied Biosystems
- (148) GlyConnect
- (149) Aminode
- (150) GeneCopoeia
- (151) GPS-Prot
- (152) RNACentral
- (153) LncRNADisease
- (154) LOVD
- (155) miR2Disease
- (156) DiseaseEnhancer
- (157) Boster Bio
- (158) Biorbyt
- (159) Biocompare
- (160) Mastermind
- (161) CTD^2 Dashboard
- (162) CraniofacialAtlas
- (163) GeneImprint
- (164) Synthego
- (165) Bio Basic
- (166) ENA
- (167) GtRNAdb
- (168) LncBase
- (169) LncBook
- (170) LNCipedia
- (171) LncRNAdb
- (172) Modomics
- (173) PDBe
- (174) Rfam
- (175) SILVA
- (176) snOPY
- (177) SRPDB
- (178) GENCODE
- (179) TarBase
- (180) MyBioSource