Aliases for ENSG00000259257 Gene

Aliases for ENSG00000259257 Gene

  • Coiled-Coil Domain-Containing Protein 117 (CC117) Pseudogene 5
  • AC037479.1 5

External Ids for ENSG00000259257 Gene

Previous GeneCards Identifiers for ENSG00000259257 Gene

  • GC15P099879

Summaries for ENSG00000259257 Gene

GeneCards Summary for ENSG00000259257 Gene

ENSG00000259257 is a Pseudogene.

Additional gene information for ENSG00000259257 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259257 Gene

Genomics for ENSG00000259257 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000259257 Gene

Promoters and enhancers for ENSG00000259257 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J099320 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 -14.8 -14849 5.4 TCF12 FOS ZNF10 RELA MEF2C EP300 ZKSCAN8 FOXA2 ZNF316 CBFB TTC23 SYNM ENSG00000259257 lnc-SYNM-6 lnc-SYNM-7 LRRC28
GH15J099340 Enhancer 0.7 Ensembl ENCODE 0.7 +3.3 3344 2.4 ZNF205 MAFK JUND ATF2 NFIL3 HLF NFE2L2 FOXA1 GATAD2A CREB1 SYNM TTC23 ENSG00000259257 lnc-SYNM-6 NONHSAG018067.2 LRRC28
GH15J099343 Enhancer 0.7 Ensembl 0.4 +6.3 6344 1.6 CTCF TCF7 RBM25 FOXA2 SMC3 SAP130 YY1 CREM FOXP1 RAD21 SYNM ENSG00000259257 NONHSAG018067.2 lnc-SYNM-6 LRRC28
GH15J099315 Enhancer 0.4 Ensembl 0.4 -22.1 -22056 0.4 TEAD4 JUND GATA3 STAT3 TTC23 lnc-SYNM-7 ENSG00000259257 lnc-SYNM-6 LRRC28
GH15J099327 Enhancer 0.3 Ensembl dbSUPER 0.4 -10.8 -10756 0.2 ENSG00000259257 lnc-SYNM-6 lnc-SYNM-7 LRRC28
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259257 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000259257 Gene

Genomic Locations for ENSG00000259257 Gene
chr15:99,337,857-99,338,481
(GRCh38/hg38)
Size:
625 bases
Orientation:
Plus strand
chr15:99,878,062-99,878,686
(GRCh37/hg19)
Size:
625 bases
Orientation:
Plus strand

Genomic View for ENSG00000259257 Gene

Genes around ENSG00000259257 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000259257 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259257 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259257 Gene

Proteins for ENSG00000259257 Gene

Post-translational modifications for ENSG00000259257 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259257 Gene

Domains & Families for ENSG00000259257 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259257 Gene

Function for ENSG00000259257 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259257 Gene

Localization for ENSG00000259257 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259257 Gene

Pathways & Interactions for ENSG00000259257 Gene

PathCards logo

SuperPathways for ENSG00000259257 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000259257 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259257 Gene

Drugs & Compounds for ENSG00000259257 Gene

No Compound Related Data Available

Transcripts for ENSG00000259257 Gene

mRNA/cDNA for ENSG00000259257 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259257 Gene

No ASD Table

Relevant External Links for ENSG00000259257 Gene

GeneLoc Exon Structure for
ENSG00000259257

Expression for ENSG00000259257 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000259257 Gene

genes like me logo Genes that share expression patterns with ENSG00000259257: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259257 Gene

Orthologs for ENSG00000259257 Gene

Evolution for ENSG00000259257 Gene

ENSEMBL:
Gene Tree for ENSG00000259257 (if available)
TreeFam:
Gene Tree for ENSG00000259257 (if available)

No data available for Orthologs for ENSG00000259257 Gene

Paralogs for ENSG00000259257 Gene

No data available for Paralogs for ENSG00000259257 Gene

Variants for ENSG00000259257 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259257 Gene

Disorders for ENSG00000259257 Gene

No disorders were found for ENSG00000259257 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259257 Gene

Publications for ENSG00000259257 Gene

No publications were found for ENSG00000259257 Gene.

No data available for Mastermind for ENSG00000259257 Gene

Products for ENSG00000259257 Gene

Sources for ENSG00000259257 Gene