Aliases for ENSG00000259211 Gene

Subcategory (RNA class) for ENSG00000259211 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000259211 Gene

  • Novel Transcript, Antisense To BAHD1 5
  • NONHSAG016601 92
  • Lnc-CCDC32-1 168
  • AC013356.2 5

External Ids for ENSG00000259211 Gene

Previous GeneCards Identifiers for ENSG00000259211 Gene

  • GC15M040756

Summaries for ENSG00000259211 Gene

GeneCards Summary for ENSG00000259211 Gene

ENSG00000259211 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000259211 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259211 Gene

Genomics for ENSG00000259211 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000259211 Gene

Promoters and enhancers for ENSG00000259211 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J040465 Enhancer 0.5 ENCODE 500.7 +0.5 525 1.1 SPI1 KLF9 GLIS1 IKZF1 HDAC1 ZNF766 MNT NR2F2 ENSG00000259211 piR-52888 CCDC32 piR-52957 BAHD1
GH15J040090 Promoter/Enhancer 3.1 VISTA EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 69.8 +366.3 366326 19.2 RXRA EP300 FOXK2 HNRNPK ZNF217 CTCF ZSCAN5C SIN3A NRF1 MYC BMF ENSG00000259211 DNAJC17 RAD51-AS1 CHST14 BAHD1 SRP14-AS1 EIF2AK4 ENSG00000259536 PLCB2
GH15J040468 Enhancer 0.2 ENCODE 500.7 -1.8 -1818 0.2 ENSG00000259211 lnc-CHST14-1 piR-52888
GH15J040952 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 37.3 -488.9 -488854 6.8 HNRNPK SIN3A MYC USF1 SP1 GTF2E2 PHF8 JUND TEAD4 ZFX CHAC1 lnc-INO80-1 ENSG00000259211 MGA INO80 DNAJC17 ENSG00000260814 BAHD1 RAD51-AS1 CHST14
GH15J040693 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 28 -228.5 -228544 3.5 ZBTB40 ZNF217 EP300 SIN3A NRF1 USF1 POLR2G SP1 PHF8 SIX5 RAD51 RAD51-AS1 CCDC32 ENSG00000259211 MGA INO80 RMDN3 DNAJC17 KNSTRN CHST14
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259211 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000259211 Gene

Genomic Locations for ENSG00000259211 Gene
chr15:40,464,193-40,466,726
(GRCh38/hg38)
Size:
2,534 bases
Orientation:
Minus strand
chr15:40,756,392-40,758,925
(GRCh37/hg19)
Size:
2,534 bases
Orientation:
Minus strand

Genomic View for ENSG00000259211 Gene

Genes around ENSG00000259211 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000259211 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259211 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259211 Gene

Proteins for ENSG00000259211 Gene

Post-translational modifications for ENSG00000259211 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259211 Gene

Domains & Families for ENSG00000259211 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259211 Gene

Function for ENSG00000259211 Gene

Phenotypes From GWAS Catalog for ENSG00000259211 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259211 Gene

Localization for ENSG00000259211 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259211 Gene

Pathways & Interactions for ENSG00000259211 Gene

PathCards logo

SuperPathways for ENSG00000259211 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000259211 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259211 Gene

Drugs & Compounds for ENSG00000259211 Gene

No Compound Related Data Available

Transcripts for ENSG00000259211 Gene

mRNA/cDNA for ENSG00000259211 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259211 Gene

No ASD Table

Relevant External Links for ENSG00000259211 Gene

GeneLoc Exon Structure for
ENSG00000259211

Expression for ENSG00000259211 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000259211 Gene

genes like me logo Genes that share expression patterns with ENSG00000259211: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259211 Gene

Orthologs for ENSG00000259211 Gene

Evolution for ENSG00000259211 Gene

ENSEMBL:
Gene Tree for ENSG00000259211 (if available)
TreeFam:
Gene Tree for ENSG00000259211 (if available)

No data available for Orthologs for ENSG00000259211 Gene

Paralogs for ENSG00000259211 Gene

No data available for Paralogs for ENSG00000259211 Gene

Variants for ENSG00000259211 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259211 Gene

Disorders for ENSG00000259211 Gene

No disorders were found for ENSG00000259211 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259211 Gene

Publications for ENSG00000259211 Gene

No publications were found for ENSG00000259211 Gene.

No data available for Mastermind for ENSG00000259211 Gene

Products for ENSG00000259211 Gene

Sources for ENSG00000259211 Gene