Aliases for ENSG00000259202 Gene

Subcategory (RNA class) for ENSG00000259202 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000259202 Gene

  • Novel Transcript, Antisense To SMAD3 5
  • HSALNG0106743 167
  • Lnc-AAGAB-5 168
  • AC012568.1 5

External Ids for ENSG00000259202 Gene

Previous GeneCards Identifiers for ENSG00000259202 Gene

  • GC15M067435

Summaries for ENSG00000259202 Gene

GeneCards Summary for ENSG00000259202 Gene

ENSG00000259202 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000259202 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000259202 Gene

Genomics for ENSG00000259202 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000259202 Gene

Promoters and enhancers for ENSG00000259202 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J067129 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +5.7 5718 23 EP300 FOXK2 ZBTB40 ZNF217 ZSCAN5C TCF12 USF1 SP1 NCOR1 GTF2E2 SMAD3 piR-59241 SKOR1 DIS3L AAGAB IQCH ENSG00000259202 piR-33458
GH15J067156 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -16.0 -15968 16.2 RBAK ZNF341 RBM25 OSR2 WT1 CREB1 CTCF REST CEBPG POLR2A SMAD3 NONHSAG017238.2 ENSG00000259202
GH15J067153 Enhancer 0.3 dbSUPER 0.4 -7.0 -6971 1 MAX ZBTB12 AAGAB IQCH SMAD3 ENSG00000259202 NONHSAG017238.2
GH15J067154 Enhancer 0.3 ENCODE dbSUPER 0.4 -6.2 -6208 0.3 AAGAB IQCH ENSG00000259202 NONHSAG017238.2 SMAD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000259202 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000259202 Gene

Genomic Locations for ENSG00000259202 Gene
chr15:67,142,734-67,146,939
(GRCh38/hg38)
Size:
4,206 bases
Orientation:
Minus strand
chr15:67,435,072-67,439,277
(GRCh37/hg19)
Size:
4,206 bases
Orientation:
Minus strand

Genomic View for ENSG00000259202 Gene

Genes around ENSG00000259202 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000259202 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000259202 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000259202 Gene

Proteins for ENSG00000259202 Gene

Post-translational modifications for ENSG00000259202 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000259202 Gene

Domains & Families for ENSG00000259202 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000259202 Gene

Function for ENSG00000259202 Gene

Phenotypes From GWAS Catalog for ENSG00000259202 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000259202 Gene

Localization for ENSG00000259202 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000259202 Gene

Pathways & Interactions for ENSG00000259202 Gene

PathCards logo

SuperPathways for ENSG00000259202 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000259202 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000259202 Gene

Drugs & Compounds for ENSG00000259202 Gene

No Compound Related Data Available

Transcripts for ENSG00000259202 Gene

mRNA/cDNA for ENSG00000259202 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000259202 Gene

No ASD Table

Relevant External Links for ENSG00000259202 Gene

GeneLoc Exon Structure for
ENSG00000259202

Expression for ENSG00000259202 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000259202 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000259202 Gene

This gene is overexpressed in Testis (x20.9), Heart - Atrial Appendage (x5.0), Brain - Caudate (basal ganglia) (x4.3), and Skin - Not Sun Exposed (Suprapubic) (x4.0).
genes like me logo Genes that share expression patterns with ENSG00000259202: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000259202 Gene

Orthologs for ENSG00000259202 Gene

Evolution for ENSG00000259202 Gene

ENSEMBL:
Gene Tree for ENSG00000259202 (if available)
TreeFam:
Gene Tree for ENSG00000259202 (if available)

No data available for Orthologs for ENSG00000259202 Gene

Paralogs for ENSG00000259202 Gene

No data available for Paralogs for ENSG00000259202 Gene

Variants for ENSG00000259202 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000259202 Gene

Disorders for ENSG00000259202 Gene

No disorders were found for ENSG00000259202 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000259202 Gene

Publications for ENSG00000259202 Gene

No publications were found for ENSG00000259202 Gene.

No data available for Mastermind for ENSG00000259202 Gene

Products for ENSG00000259202 Gene

Sources for ENSG00000259202 Gene