Aliases for ENSG00000258763 Gene

Subcategory (RNA class) for ENSG00000258763 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000258763 Gene

  • Novel Transcript, Antisense To OR2AP1, OR6C4, OR6C68 & OR6C2 5
  • HSALNG0091417 164
  • Lnc-OR6C70-1 165
  • AC122685.1 5

External Ids for ENSG00000258763 Gene

Previous GeneCards Identifiers for ENSG00000258763 Gene

  • GC12M055828

Summaries for ENSG00000258763 Gene

GeneCards Summary for ENSG00000258763 Gene

ENSG00000258763 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000258763 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000258763 Gene

Genomics for ENSG00000258763 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000258763 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J055498 Enhancer 1 Ensembl ENCODE 0.2 +85.9 85863 2.5 GATAD2A SOX13 SP1 CEBPA ETS1 TCF7 ZKSCAN8 FOXA2 MAFF USF1 OR6C70 MIP ENSG00000257303 OR6C68 piR-48553-085 OR6C4 ENSG00000258763
GH12J055467 Enhancer 0.6 FANTOM5 Ensembl 0.1 +117.2 117170 3 CREB1 CEBPG ATF3 SPI1 ETV6 OR6C70 OR6C68 APOF OR10A7 MMP19 piR-55361-124 OR6C2 ENSG00000258763
GH12J055478 Enhancer 0.2 Ensembl 0.1 +107.4 107370 0.2 piR-36393-105 piR-31162-096 piR-39488-069 piR-56022-106 piR-43099-113 piR-49732-108 piR-56759-126 piR-54764-122 piR-60597-012 piR-61028-109
GH12J055445 Enhancer 0.2 Ensembl 0.1 +139.9 139898 0.5 OR6C2 piR-55361-124 OR6C70 ENSG00000258763
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000258763 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000258763 Gene

Genomic Locations for ENSG00000258763 Gene
chr12:55,434,734-55,585,471
(GRCh38/hg38)
Size:
150,738 bases
Orientation:
Minus strand
chr12:55,828,521-55,979,255
(GRCh37/hg19)
Size:
150,735 bases
Orientation:
Minus strand

Genomic View for ENSG00000258763 Gene

Genes around ENSG00000258763 on UCSC Golden Path with GeneCards custom track
ENSG00000258763 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000258763 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000258763 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000258763 Gene

Proteins for ENSG00000258763 Gene

Post-translational modifications for ENSG00000258763 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000258763 Gene

Domains & Families for ENSG00000258763 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000258763 Gene

Function for ENSG00000258763 Gene

Phenotypes From GWAS Catalog for ENSG00000258763 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000258763 Gene

Localization for ENSG00000258763 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000258763 Gene

Pathways & Interactions for ENSG00000258763 Gene

PathCards logo

SuperPathways for ENSG00000258763 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000258763 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000258763 Gene

Drugs & Compounds for ENSG00000258763 Gene

No Compound Related Data Available

Transcripts for ENSG00000258763 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000258763 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00000CCB5C_9606 lncRNA 555 3

Ensembl: ENST00000556750 (view in UCSC) ,

LncBook: HSALNT0189659,

LNCipedia: lnc-OR6C70-1:1,

URS00004B20EC_9606 lncRNA 517 3

Ensembl: ENST00000554049 (view in UCSC) ,

LncBook: HSALNT0189660,

LNCipedia: lnc-OR6C70-1:3,

URS000056AB66_9606 lncRNA 497 3

Ensembl: ENST00000555138 (view in UCSC) ,

LncBook: HSALNT0189661,

LNCipedia: lnc-OR6C70-1:2,

URS00007829C8_9606 lncRNA 535 2

Ensembl: ENST00000555146 (view in UCSC) ,

LNCipedia: lnc-OR6C70-1:5,

URS00000AE75E_9606 lncRNA 532 1

LNCipedia: lnc-OR6C70-1:4,

ENSG00000258763 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000258763 Gene

No ASD Table

Relevant External Links for ENSG00000258763 Gene

GeneLoc Exon Structure for
ENSG00000258763

No data available for mRNA/cDNA for ENSG00000258763 Gene

Expression for ENSG00000258763 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000258763 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000258763 Gene

This gene is overexpressed in Heart - Atrial Appendage (x26.5), Heart - Left Ventricle (x13.4), and Testis (x10.8).
genes like me logo Genes that share expression patterns with ENSG00000258763: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000258763 Gene

Orthologs for ENSG00000258763 Gene

Evolution for ENSG00000258763 Gene

ENSEMBL:
Gene Tree for ENSG00000258763 (if available)
TreeFam:
Gene Tree for ENSG00000258763 (if available)

No data available for Orthologs for ENSG00000258763 Gene

Paralogs for ENSG00000258763 Gene

No data available for Paralogs for ENSG00000258763 Gene

Variants for ENSG00000258763 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000258763 Gene

Disorders for ENSG00000258763 Gene

Additional Disease Information for ENSG00000258763

No disorders were found for ENSG00000258763 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000258763 Gene

Publications for ENSG00000258763 Gene

No publications were found for ENSG00000258763 Gene.

No data available for Mastermind for ENSG00000258763 Gene

Products for ENSG00000258763 Gene

Sources for ENSG00000258763 Gene