Aliases for ENSG00000258699 Gene

Subcategory (RNA class) for ENSG00000258699 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000258699 Gene

  • Novel Transcript, Antisense To FOXN3 5
  • NONHSAG015672 92
  • HSALNG0103084 167
  • AL357093.1 5
  • Lnc-TTC8-3 168

External Ids for ENSG00000258699 Gene

Previous GeneCards Identifiers for ENSG00000258699 Gene

  • GC14P089821

Summaries for ENSG00000258699 Gene

GeneCards Summary for ENSG00000258699 Gene

ENSG00000258699 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000258699 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000258699 Gene

Genomics for ENSG00000258699 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000258699 Gene

Promoters and enhancers for ENSG00000258699 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J089362 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 +12.2 12155 8.8 ZBTB40 SIN3A POLR2G SP1 NCOR1 EP300 KDM6A TCF7 JUND RELA FOXN3 PTPN21 ENSG00000258699 ENSG00000258752 LOC101928817 ENSG00000258380
GH14J089359 Enhancer 0.6 ENCODE dbSUPER 0.7 +4.6 4627 1.3 RBM22 EBF1 SPI1 ZNF366 FOXN3 ENSG00000258699 LOC101928817 ENSG00000258752 ENSG00000258380
GH14J089381 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +37.8 37841 22.2 EP300 ZSCAN5C POLR2G USF1 SP1 NCOR1 TEAD4 CTCF ZIC2 KDM6A FOXN3 ENSG00000252655 FOXN3-AS1 RNU4-22P ENSG00000258983 ENSG00000258380 ENSG00000258699
GH14J089356 Enhancer 0.5 ENCODE dbSUPER 0.7 +2.1 2116 0.5 ZNF24 ZNF121 ENSG00000258699 ENSG00000258752 LOC101928817 ENSG00000258380 FOXN3
GH14J089377 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +23.4 23441 3 FOS ATF2 RBM22 POU2F2 SMARCA4 JUNB BHLHE40 TRIM28 BCL3 ATF7 FOXN3 ENSG00000258380 ENSG00000258699
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000258699 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000258699 Gene

Genomic Locations for ENSG00000258699 Gene
chr14:89,355,060-89,356,571
(GRCh38/hg38)
Size:
1,512 bases
Orientation:
Plus strand
chr14:89,821,404-89,822,915
(GRCh37/hg19)
Size:
1,512 bases
Orientation:
Plus strand

Genomic View for ENSG00000258699 Gene

Genes around ENSG00000258699 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000258699 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000258699 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000258699 Gene

Proteins for ENSG00000258699 Gene

Post-translational modifications for ENSG00000258699 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000258699 Gene

Domains & Families for ENSG00000258699 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000258699 Gene

Function for ENSG00000258699 Gene

Phenotypes From GWAS Catalog for ENSG00000258699 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000258699 Gene

Localization for ENSG00000258699 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000258699 Gene

Pathways & Interactions for ENSG00000258699 Gene

PathCards logo

SuperPathways for ENSG00000258699 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000258699 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000258699 Gene

Drugs & Compounds for ENSG00000258699 Gene

No Compound Related Data Available

Transcripts for ENSG00000258699 Gene

mRNA/cDNA for ENSG00000258699 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000258699 Gene

No ASD Table

Relevant External Links for ENSG00000258699 Gene

GeneLoc Exon Structure for
ENSG00000258699

Expression for ENSG00000258699 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000258699 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000258699 Gene

This gene is overexpressed in Fallopian Tube (x10.7), Brain - Caudate (basal ganglia) (x6.9), Cervix - Endocervix (x6.0), and Brain - Hypothalamus (x5.6).
genes like me logo Genes that share expression patterns with ENSG00000258699: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000258699 Gene

Orthologs for ENSG00000258699 Gene

Evolution for ENSG00000258699 Gene

ENSEMBL:
Gene Tree for ENSG00000258699 (if available)
TreeFam:
Gene Tree for ENSG00000258699 (if available)

No data available for Orthologs for ENSG00000258699 Gene

Paralogs for ENSG00000258699 Gene

No data available for Paralogs for ENSG00000258699 Gene

Variants for ENSG00000258699 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000258699 Gene

Disorders for ENSG00000258699 Gene

No disorders were found for ENSG00000258699 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000258699 Gene

Publications for ENSG00000258699 Gene

No publications were found for ENSG00000258699 Gene.

No data available for Mastermind for ENSG00000258699 Gene

Products for ENSG00000258699 Gene

Sources for ENSG00000258699 Gene