ENSG00000258472 Gene (Protein Coding)

 

GC17M028455
GIFtS:
10

Aliases for ENSG00000258472 Gene

Aliases for ENSG00000258472 Gene

  • Uncharacterized Protein 13
  • Novel Protein 5
  • AC005726.1 5

External Ids for ENSG00000258472 Gene

Previous GeneCards Identifiers for ENSG00000258472 Gene

  • GC17M026908
  • GC17M026896
  • GC17M027000
  • GC17M027147

Summaries for ENSG00000258472 Gene

GeneCards Summary for ENSG00000258472 Gene

ENSG00000258472 is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include transferase activity, transferring phosphorus-containing groups. An important paralog of this gene is SPAG5.

Additional gene information for ENSG00000258472 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000258472 Gene

Genomics for ENSG00000258472 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000258472 Gene

Promoters and enhancers for ENSG00000258472 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH17J028614 Promoter 0.6 EPDnew 750.6 0.0 -8 0.1 ZIC2 SUPT5H POLR2A ENSG00000258472 RSKR lnc-KIAA0100-1 RF00017-2324 SPAG5-AS1 RF00017-2319
GH17J028613 Enhancer 0.5 ENCODE 750.6 +0.7 749 0.2 CTCF RAD21 REST TRIM22 ZBTB48 ZNF143 FOS HOMEZ ENSG00000258472 RSKR lnc-KIAA0100-1 lnc-KIAA0100-4 SPAG5-AS1 RF00017-2319
GH17J028612 Enhancer 0.5 Ensembl 750.6 +1.4 1396 0.8 CTCF REST JUND FOS HOMEZ NFATC1 ENSG00000258472 RSKR lnc-KIAA0100-1 lnc-KIAA0100-4 PROCA1 SPAG5-AS1 RF00017-2319
GH17J028616 Promoter 0.3 EPDnew 750.6 -0.6 -597 0.1 ENSG00000258472 RSKR lnc-KIAA0100-1 RF00017-2324 SPAG5-AS1 KIAA0100 RF00017-2319
GH17J028617 Promoter 0.3 EPDnew 750.6 -0.4 -350 0.1 ENSG00000258472 RSKR lnc-KIAA0100-1 RF00017-2324 SPAG5-AS1 KIAA0100 RF00017-2319
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000258472 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000258472 Gene

Genomic Locations for ENSG00000258472 Gene
chr17:28,455,752-28,614,197
(GRCh38/hg38)
Size:
158,446 bases
Orientation:
Minus strand
chr17:26,782,770-26,941,215
(GRCh37/hg19)
Size:
158,446 bases
Orientation:
Minus strand

Genomic View for ENSG00000258472 Gene

Genes around ENSG00000258472 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000258472 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000258472 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000258472 Gene

Proteins for ENSG00000258472 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for ENSG00000258472 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    E9PMD0-E9PMD0_HUMAN
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    E9PMD0

    Protein attributes for ENSG00000258472 Gene

    Size:
    336 amino acids
    Molecular mass:
    38244 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000258472 Gene

Post-translational modifications for ENSG00000258472 Gene

No Post-translational modifications

Other Protein References for ENSG00000258472 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ENSG00000258472 Gene

Domains & Families for ENSG00000258472 Gene

Protein Domains for ENSG00000258472 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with ENSG00000258472: view

No data available for Gene Families , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000258472 Gene

Function for ENSG00000258472 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ENSG00000258472 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000258472 Gene

Localization for ENSG00000258472 Gene

Subcellular locations from the

Human Protein Atlas (HPA)
  • Nucleoplasm (2)
  • Plasma membrane (2)
  • Vesicles (2)
See all subcellular structures

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ENSG00000258472 Gene

Pathways & Interactions for ENSG00000258472 Gene

PathCards logo

SuperPathways for ENSG00000258472 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000258472 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0051988 regulation of attachment of spindle microtubules to kinetochore IEA --
genes like me logo Genes that share ontologies with ENSG00000258472: view

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000258472 Gene

Drugs & Compounds for ENSG00000258472 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000258472 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000258472 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000258472 Gene

No ASD Table

Relevant External Links for ENSG00000258472 Gene

GeneLoc Exon Structure for
ENSG00000258472

Expression for ENSG00000258472 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000258472 Gene

mRNA expression in normal human tissues for ENSG00000258472 Gene
mRNA expression by GTEx for ENSG00000258472 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000258472 Gene

This gene is overexpressed in Kidney - Cortex (x4.7).
genes like me logo Genes that share expression patterns with ENSG00000258472: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000258472 Gene

Orthologs for ENSG00000258472 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000258472 Gene

Organism Taxonomy Gene Similarity Type Details
platypus
(Ornithorhynchus anatinus)
 Mammalia -- 33
  • 13 (a)
 ManyToMany
-- 33
  • 7 (a)
 ManyToMany
oppossum
(Monodelphis domestica)
 Mammalia -- 33
  • 10 (a)
 OneToMany
chicken
(Gallus gallus)
 Aves -- 33
  • 6 (a)
 OneToMany
zebrafish
(Danio rerio)
 Actinopterygii SPAG5 33
  • 3 (a)
 OneToMany
Species where no ortholog for ENSG00000258472 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ENSG00000258472 Gene

ENSEMBL:
Gene Tree for ENSG00000258472 (if available)
TreeFam:
Gene Tree for ENSG00000258472 (if available)

Paralogs for ENSG00000258472 Gene

Paralogs for ENSG00000258472 Gene

genes like me logo Genes that share paralogs with ENSG00000258472: view

Variants for ENSG00000258472 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000258472 Gene

Disorders for ENSG00000258472 Gene

No disorders were found for ENSG00000258472 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000258472 Gene

Publications for ENSG00000258472 Gene

  1. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody MC … Nusbaum C (Nature 2006) 13 56

No data available for External Links for ENSG00000258472 Gene

Products for ENSG00000258472 Gene

Sources for ENSG00000258472 Gene