Aliases for ENSG00000258422 Gene

Aliases for ENSG00000258422 Gene

  • Novel Transcript, Antisense To SLC8A3 5
  • NONHSAG015341.2 91
  • NONHSAG015343.2 91
  • HSALNG0102203 164
  • Lnc-SMOC1-2 165
  • AL160191.1 5

External Ids for ENSG00000258422 Gene

Previous GeneCards Identifiers for ENSG00000258422 Gene

  • GC14P070653

Summaries for ENSG00000258422 Gene

GeneCards Summary for ENSG00000258422 Gene

ENSG00000258422 is an Uncategorized gene.

Additional gene information for ENSG00000258422 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000258422 Gene

Genomics for ENSG00000258422 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000258422 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J070186 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas 606.2 +1.2 1215 4.6 ZNF629 ZIC2 POLR2A PATZ1 EZH2 ZNF600 ZNF341 PKNOX1 ZBTB20 SP2 ENSG00000258422 SLC8A3 LOC646548 COX16 SMOC1
GH14J070223 Promoter 0.9 Ensembl 9.4 +36.6 36577 1 CTCF PRDM10 LEF1 IKZF1 POLR2A ZNF341 SP2 HMBOX1 MTA3 ZSCAN29 LOC107984686 lnc-SLC8A3-2 SLC8A3 ENSG00000258422 LOC646548 COX16
GH14J070254 Promoter/Enhancer 1.2 ENCODE CraniofacialAtlas 4.7 +68.0 67956 1.6 ZBTB33 PHF21A RBFOX2 PATZ1 REST ZNF600 KMT2B KLF9 ZFX ZBTB20 ENSG00000259033 LOC101928046 piR-33735-026 piR-35564-045 piR-58297-163 COX16 SRSF5 SLC8A3 RNU2-51P ADAM20
GH14J070229 Enhancer 0.3 Ensembl ENCODE 9.4 +43.1 43078 1.2 ENSG00000274330 COX16 ENSG00000258422 SLC8A3 lnc-SLC8A3-2 LOC646548
GH14J070250 Enhancer 0.3 Ensembl 9.3 +63.7 63678 0.8 CEBPB ENSG00000258422 ADAM21P1 HSALNG0102206 SLC8A3 COX16
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000258422 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000258422 Gene

Genomic Locations for ENSG00000258422 Gene
chr14:70,187,123-70,230,187
(GRCh38/hg38)
Size:
43,065 bases
Orientation:
Plus strand
chr14:70,653,840-70,696,904
(GRCh37/hg19)
Size:
43,065 bases
Orientation:
Plus strand

Genomic View for ENSG00000258422 Gene

Genes around ENSG00000258422 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000258422 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000258422 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000258422 Gene

Proteins for ENSG00000258422 Gene

Post-translational modifications for ENSG00000258422 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000258422 Gene

Domains & Families for ENSG00000258422 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000258422 Gene

Function for ENSG00000258422 Gene

Phenotypes From GWAS Catalog for ENSG00000258422 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000258422 Gene

Localization for ENSG00000258422 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000258422 Gene

Pathways & Interactions for ENSG00000258422 Gene

PathCards logo

SuperPathways for ENSG00000258422 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000258422 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000258422 Gene

Drugs & Compounds for ENSG00000258422 Gene

No Compound Related Data Available

Transcripts for ENSG00000258422 Gene

mRNA/cDNA for ENSG00000258422 Gene

3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
11 RNACentral transcripts :
4 NONCODE transcripts :
3 LncBook transcripts :
12 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000258422 Gene

No ASD Table

Relevant External Links for ENSG00000258422 Gene

GeneLoc Exon Structure for
ENSG00000258422

Expression for ENSG00000258422 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000258422 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000258422 Gene

This gene is overexpressed in Testis (x30.0) and Muscle - Skeletal (x4.1).
genes like me logo Genes that share expression patterns with ENSG00000258422: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000258422 Gene

Orthologs for ENSG00000258422 Gene

Evolution for ENSG00000258422 Gene

ENSEMBL:
Gene Tree for ENSG00000258422 (if available)
TreeFam:
Gene Tree for ENSG00000258422 (if available)

No data available for Orthologs for ENSG00000258422 Gene

Paralogs for ENSG00000258422 Gene

No data available for Paralogs for ENSG00000258422 Gene

Variants for ENSG00000258422 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000258422 Gene

Disorders for ENSG00000258422 Gene

No disorders were found for ENSG00000258422 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000258422 Gene

Publications for ENSG00000258422 Gene

No publications were found for ENSG00000258422 Gene.

No data available for Mastermind for ENSG00000258422 Gene

Products for ENSG00000258422 Gene

Sources for ENSG00000258422 Gene