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Aliases for ENSG00000258086 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000258086 Gene

  • Novel Transcript, Antisense To ZNF385A, GPR84, ITGA5 And GTSF1 5
  • AC079313.1 5

External Ids for ENSG00000258086 Gene

Previous GeneCards Identifiers for ENSG00000258086 Gene

  • GC12P054747
  • GC12P054356
  • GC12P054357

Summaries for ENSG00000258086 Gene

GeneCards Summary for ENSG00000258086 Gene

ENSG00000258086 is an RNA Gene.

Additional gene information for ENSG00000258086 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000258086 Gene

Genomics for ENSG00000258086 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000258086 Gene

Promoters and enhancers for ENSG00000258086 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J054350 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE dbSUPER 600.7 -1.7 -1725 4.5 SP1 CBFA2T2 ZNF148 ZNF121 ZSCAN21 YY1 SP7 PRDM1 MZF1 EGR1 ENSG00000258086 ENSG00000258137 LOC102724050 RNU6-950P COPZ1 ZNF385A CBX5 GPR84 PDE1B RN7SL744P
GH12J054354 Promoter/Enhancer 2.2 FANTOM5 Ensembl ENCODE dbSUPER 14.1 +4.2 4156 6.5 ZNF473 SP1 CC2D1A ZFX ELF3 CTCF CBFA2T2 ZNF148 MLLT1 ZNF121 SP1 PCBP2 ENSG00000258344 CBX5 GPR84 ZNF385A MAP3K12 ATF7 LOC100652999 HNRNPA1
GH12J053378 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 13.5 -972.0 -972029 7.3 HDGF MTA3 SP1 CC2D1A ZFX CTCF ELF3 ZKSCAN8 ZNF148 NKRF SP1 PIR43704 AAAS PRR13 HOXC8 HOXC9 ZNF740 TARBP2 ENSG00000258086 AMHR2
GH12J054323 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 13.8 -25.9 -25905 8.3 CC2D1A ELF3 SP1 ZFX CTCF ZKSCAN8 CBFA2T2 NKRF POLR2A MLLT1 COPZ1 ENSG00000258344 SP1 PCBP2 ATF7 HOXC8 HOXC9 HNRNPA1 ENSG00000258086 TARBP2
GH12J054377 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 13.8 +25.7 25696 3 CC2D1A CTCF ZNF148 MLLT1 GTF2F1 ZSCAN21 MYC YY1 SP7 KLF14 ENSG00000258086 HOXC5 MIR148B RNU6-950P COPZ1 HOXC8 ITGA5 HOXC9 HOXC12 ZNF385A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000258086 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000258086 Gene

Genomic Locations for ENSG00000258086 Gene
chr12:54,353,792-54,466,985
(GRCh38/hg38)
Size:
113,194 bases
Orientation:
Plus strand
chr12:54,747,576-54,860,769
(GRCh37/hg19)
Size:
113,194 bases
Orientation:
Plus strand

Genomic View for ENSG00000258086 Gene

Genes around ENSG00000258086 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000258086 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000258086 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000258086 Gene

Proteins for ENSG00000258086 Gene

Post-translational modifications for ENSG00000258086 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000258086 Gene

Domains & Families for ENSG00000258086 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000258086 Gene

Function for ENSG00000258086 Gene

Phenotypes From GWAS Catalog for ENSG00000258086 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000258086 Gene

Localization for ENSG00000258086 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000258086 Gene

Pathways & Interactions for ENSG00000258086 Gene

PathCards logo

SuperPathways for ENSG00000258086 Gene

No Data Available

Interacting Proteins for ENSG00000258086 Gene

Gene Ontology (GO) - Biological Process for ENSG00000258086 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000258086 Gene

Drugs & Compounds for ENSG00000258086 Gene

No Compound Related Data Available

Transcripts for ENSG00000258086 Gene

mRNA/cDNA for ENSG00000258086 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000258086 Gene

No ASD Table

Relevant External Links for ENSG00000258086 Gene

GeneLoc Exon Structure for
ENSG00000258086

Expression for ENSG00000258086 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000258086 Gene

mRNA expression in normal human tissues for ENSG00000258086 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000258086 Gene

This gene is overexpressed in Artery - Tibial (x10.4), Colon - Sigmoid (x8.7), and Bladder (x5.8).
genes like me logo Genes that share expression patterns with ENSG00000258086: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000258086 Gene

Orthologs for ENSG00000258086 Gene

Evolution for ENSG00000258086 Gene

ENSEMBL:
Gene Tree for ENSG00000258086 (if available)
TreeFam:
Gene Tree for ENSG00000258086 (if available)

No data available for Orthologs for ENSG00000258086 Gene

Paralogs for ENSG00000258086 Gene

No data available for Paralogs for ENSG00000258086 Gene

Variants for ENSG00000258086 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000258086 Gene

Disorders for ENSG00000258086 Gene

No disorders were found for ENSG00000258086 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000258086 Gene

Publications for ENSG00000258086 Gene

No publications were found for ENSG00000258086 Gene.

No data available for External Links for ENSG00000258086 Gene

Products for ENSG00000258086 Gene

Sources for ENSG00000258086 Gene

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