Aliases for ENSG00000257890 Gene

Subcategory (RNA class) for ENSG00000257890 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000257890 Gene

  • Novel Transcript 5
  • NONHSAG012165.2 91
  • Lnc-NUAK1-1 165
  • AC011595.2 5

External Ids for ENSG00000257890 Gene

Previous GeneCards Identifiers for ENSG00000257890 Gene

  • GC12M106444

Summaries for ENSG00000257890 Gene

GeneCards Summary for ENSG00000257890 Gene

ENSG00000257890 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000257890 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000257890 Gene

Genomics for ENSG00000257890 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000257890 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J106057 Enhancer 0.6 Ensembl ENCODE dbSUPER 620.2 -0.5 -517 1.6 MAFK ENSG00000257890 RF00017-1241 NUAK1 APPL2
GH12J106073 Promoter/Enhancer 1.8 Ensembl ENCODE CraniofacialAtlas dbSUPER 9.2 -21.4 -21444 12.6 ZBTB33 TEAD4 PRDM10 ZNF629 ZNF692 BACH1 STAT3 PRDM1 RELA ZNF776 MTERF2 ENSG00000257545 ENSG00000260329 ENSG00000257890 CKAP4 RF00017-1241 NUAK1 APPL2
GH12J106044 Enhancer 0.9 Ensembl ENCODE dbSUPER 12.2 +12.9 12907 1.2 ZNF629 PRDM1 ZNF316 MAFF MYNN MAFK ZBTB17 ZBTB1 RCOR1 JUND ENSG00000257890 piR-52294-040 NUAK1 APPL2
GH12J106105 Enhancer 1.2 ENCODE CraniofacialAtlas dbSUPER 8.2 -50.1 -50057 5.3 TEAD4 PRDM10 ZNF629 RFX1 KDM1A ZNF692 FOXA1 PRDM1 ZSCAN4 PATZ1 NUAK1 ENSG00000257890 ENSG00000257438 lnc-TCP11L2-4 APPL2
GH12J106095 Enhancer 1.2 Ensembl ENCODE dbSUPER 7.8 -39.5 -39547 4.4 GATAD2A NFKBIZ RCOR2 FOXA1 RXRB IRF2 IKZF2 SP1 GABPA CEBPA ENSG00000257890 RF00017-1241 NUAK1 APPL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000257890 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000257890 Gene

Genomic Locations for ENSG00000257890 Gene
chr12:106,050,961-106,058,254
(GRCh38/hg38)
Size:
7,294 bases
Orientation:
Minus strand
chr12:106,444,739-106,452,032
(GRCh37/hg19)
Size:
7,294 bases
Orientation:
Minus strand

Genomic View for ENSG00000257890 Gene

Genes around ENSG00000257890 on UCSC Golden Path with GeneCards custom track
ENSG00000257890 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000257890 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000257890 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000257890 Gene

Proteins for ENSG00000257890 Gene

Post-translational modifications for ENSG00000257890 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000257890 Gene

Domains & Families for ENSG00000257890 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000257890 Gene

Function for ENSG00000257890 Gene

Phenotypes From GWAS Catalog for ENSG00000257890 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000257890 Gene

Localization for ENSG00000257890 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000257890 Gene

Pathways & Interactions for ENSG00000257890 Gene

PathCards logo

SuperPathways for ENSG00000257890 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000257890 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000257890 Gene

Drugs & Compounds for ENSG00000257890 Gene

No Compound Related Data Available

Transcripts for ENSG00000257890 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000257890 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002D3EB5_9606 lncRNA 632 3

Ensembl: ENST00000546699 (view in UCSC) ,

LNCipedia: lnc-NUAK1-1:1,

NONCODE: NONHSAT030464.2,

ENSG00000257890 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000257890 Gene

No ASD Table

Relevant External Links for ENSG00000257890 Gene

GeneLoc Exon Structure for
ENSG00000257890

No data available for mRNA/cDNA for ENSG00000257890 Gene

Expression for ENSG00000257890 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000257890 Gene

genes like me logo Genes that share expression patterns with ENSG00000257890: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000257890 Gene

Orthologs for ENSG00000257890 Gene

Evolution for ENSG00000257890 Gene

ENSEMBL:
Gene Tree for ENSG00000257890 (if available)
TreeFam:
Gene Tree for ENSG00000257890 (if available)

No data available for Orthologs for ENSG00000257890 Gene

Paralogs for ENSG00000257890 Gene

No data available for Paralogs for ENSG00000257890 Gene

Variants for ENSG00000257890 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000257890 Gene

Disorders for ENSG00000257890 Gene

No disorders were found for ENSG00000257890 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000257890 Gene

Publications for ENSG00000257890 Gene

No publications were found for ENSG00000257890 Gene.

No data available for Mastermind for ENSG00000257890 Gene

Products for ENSG00000257890 Gene

Sources for ENSG00000257890 Gene