Aliases for ENSG00000257835 Gene

Subcategory (RNA class) for ENSG00000257835 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000257835 Gene

  • Novel Transcript 5
  • NONHSAG011762.2 91
  • Lnc-ZDHHC17-19 165
  • HSALNG0092586 164
  • AC073591.1 5

External Ids for ENSG00000257835 Gene

Previous GeneCards Identifiers for ENSG00000257835 Gene

  • GC12P077773

Summaries for ENSG00000257835 Gene

GeneCards Summary for ENSG00000257835 Gene

ENSG00000257835 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000257835 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000257835 Gene

Genomics for ENSG00000257835 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000257835 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J077378 Enhancer 0.3 Ensembl 610.9 -1.6 -1569 0.8 ZNF610 ENSG00000257835 piR-56341-039 NAV3 NONHSAG011762.2
GH12J077383 Enhancer 0.3 Ensembl 22.1 +4.5 4530 1.8 JUND ENSG00000257835 LOC105369856 NAV3 NONHSAG011762.2
GH12J077377 Enhancer 0.2 FANTOM5 22.1 -2.3 -2267 0.2 ENSG00000257835 CSRP2 piR-56341-039 NAV3 NONHSAG011762.2
GH12J077231 Enhancer 0.7 Ensembl ENCODE 4.8 -147.9 -147874 1.8 PRDM10 CEBPB EP300 CEBPG SPI1 RCOR1 JUND ZNF366 NFE2L2 GATA2 ENSG00000257835 piR-50443-085 HSALNG0092583 LINC02464 NAV3 E2F7
GH12J077406 Enhancer 0.3 Ensembl ENCODE 9.9 +26.3 26331 1 ENSG00000257835 LOC105369856 piR-55948-025 NAV3 NONHSAG011762.2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000257835 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000257835 Gene

Genomic Locations for ENSG00000257835 Gene
chr12:77,379,770-77,572,354
(GRCh38/hg38)
Size:
192,585 bases
Orientation:
Plus strand
chr12:77,773,600-77,784,644
(GRCh37/hg19)
Size:
11,045 bases
Orientation:
Plus strand

Genomic View for ENSG00000257835 Gene

Genes around ENSG00000257835 on UCSC Golden Path with GeneCards custom track
ENSG00000257835 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000257835 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000257835 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000257835 Gene

Proteins for ENSG00000257835 Gene

Post-translational modifications for ENSG00000257835 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000257835 Gene

Domains & Families for ENSG00000257835 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000257835 Gene

Function for ENSG00000257835 Gene

Phenotypes From GWAS Catalog for ENSG00000257835 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000257835 Gene

Localization for ENSG00000257835 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000257835 Gene

Pathways & Interactions for ENSG00000257835 Gene

PathCards logo

SuperPathways for ENSG00000257835 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000257835 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000257835 Gene

Drugs & Compounds for ENSG00000257835 Gene

No Compound Related Data Available

Transcripts for ENSG00000257835 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000257835 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000EF228F_9606 lncRNA 652 1

Ensembl: ENST00000552736 (view in UCSC) ,

URS0000533AF1_9606 lncRNA 597 3

LncBook: HSALNT0191848,

LNCipedia: lnc-ZDHHC17-19:2,

NONCODE: NONHSAT029610.2,

URS00008B88F9_9606 lncRNA 711 2

LncBook: HSALNT0191846,

NONCODE: NONHSAT029609.2,

URS00008C1809_9606 lncRNA 344 1

LNCipedia: lnc-ZDHHC17-19:1,

ENSG00000257835 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000257835 Gene

No ASD Table

Relevant External Links for ENSG00000257835 Gene

GeneLoc Exon Structure for
ENSG00000257835

No data available for mRNA/cDNA for ENSG00000257835 Gene

Expression for ENSG00000257835 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000257835 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000257835 Gene

This gene is overexpressed in Testis (x41.1) and Whole Blood (x7.3).
genes like me logo Genes that share expression patterns with ENSG00000257835: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000257835 Gene

Orthologs for ENSG00000257835 Gene

Evolution for ENSG00000257835 Gene

ENSEMBL:
Gene Tree for ENSG00000257835 (if available)
TreeFam:
Gene Tree for ENSG00000257835 (if available)

No data available for Orthologs for ENSG00000257835 Gene

Paralogs for ENSG00000257835 Gene

No data available for Paralogs for ENSG00000257835 Gene

Variants for ENSG00000257835 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000257835 Gene

Disorders for ENSG00000257835 Gene

Additional Disease Information for ENSG00000257835

No disorders were found for ENSG00000257835 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000257835 Gene

Publications for ENSG00000257835 Gene

No publications were found for ENSG00000257835 Gene.

No data available for Mastermind for ENSG00000257835 Gene

Products for ENSG00000257835 Gene

Sources for ENSG00000257835 Gene