Aliases for ENSG00000257764 Gene

Subcategory (RNA class) for ENSG00000257764 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000257764 Gene

  • Novel Transcript, Antisense To LYZ 5
  • NONHSAG011636.2 91
  • HSALNG0092235 164
  • Lnc-LRRC10-1 165
  • AC020656.1 5

External Ids for ENSG00000257764 Gene

Previous GeneCards Identifiers for ENSG00000257764 Gene

  • GC12M069746
  • GC12M069353

Summaries for ENSG00000257764 Gene

GeneCards Summary for ENSG00000257764 Gene

ENSG00000257764 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000257764 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000257764 Gene

Genomics for ENSG00000257764 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000257764 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J069354 Enhancer 1.2 Ensembl ENCODE dbSUPER 600.7 -0.9 -867 1 GATAD2A ATF7 SOX13 IKZF1 MTA2 RBFOX2 MTA1 IRF2 KMT2B CTBP1 ENSG00000257764 MN298678-018 LYZ YEATS4 FRS2
GH12J069348 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 0.7 +4.3 4333 3.8 HNRNPL GATAD2A TFE3 SOX13 IKZF1 NFKBIZ RCOR2 RBFOX2 RXRB IRF2 LYZ YEATS4 ENSG00000257764 MN298678-018
GH12J069328 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +22.7 22725 6.1 GATAD2A ATF7 TFE3 SOX13 IKZF1 FOXA1 PRDM1 ZIC2 RBFOX2 RXRB ENSG00000274979 piR-30188-045 piR-60246-043 LYZ NUP107 YEATS4 CNOT2 CPSF6 KRT8P39 CPM
GH12J069337 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +16.1 16121 2.2 GATAD2A REST RCOR2 RXRB SP1 CEBPA SOX13 TCF7 FOXA2 ATF3 LYZ YEATS4 CPM piR-60246-043 ENSG00000257764 CPSF6
GH12J069357 Enhancer 0.8 ENCODE 0.7 -3.4 -3422 0.2 CREB1 CTCF ZNF629 FOXA1 PRDM1 PKNOX1 RXRB REST RAD21 TRIM22 YEATS4 ENSG00000257764 LYZ
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000257764 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000257764 Gene

Genomic Locations for ENSG00000257764 Gene
chr12:69,136,560-69,354,234
(GRCh38/hg38)
Size:
217,675 bases
Orientation:
Minus strand
chr12:69,747,273-69,748,005
(GRCh37/hg19)
Size:
733 bases
Orientation:
Minus strand

Genomic View for ENSG00000257764 Gene

Genes around ENSG00000257764 on UCSC Golden Path with GeneCards custom track
ENSG00000257764 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000257764 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000257764 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000257764 Gene

Proteins for ENSG00000257764 Gene

Post-translational modifications for ENSG00000257764 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000257764 Gene

Domains & Families for ENSG00000257764 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000257764 Gene

Function for ENSG00000257764 Gene

Phenotypes From GWAS Catalog for ENSG00000257764 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000257764 Gene

Localization for ENSG00000257764 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000257764 Gene

Pathways & Interactions for ENSG00000257764 Gene

PathCards logo

SuperPathways for ENSG00000257764 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000257764 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000257764 Gene

Drugs & Compounds for ENSG00000257764 Gene

No Compound Related Data Available

Transcripts for ENSG00000257764 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000257764 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000032778C_9606 lncRNA 599 4

Ensembl: ENST00000548900 (view in UCSC) ,

LncBook: HSALNT0191102,

LNCipedia: lnc-LRRC10-1:1,

NONCODE: NONHSAT029361.2,

URS00008B5AE4_9606 lncRNA 429 3

LncBook: HSALNT0191101,

LNCipedia: lnc-LRRC10-1:2,

NONCODE: NONHSAT029360.2,

URS00009BB37A_9606 lncRNA 728 2

LncBook: HSALNT0191076,

NONCODE: NONHSAT163714.1,

URS00009B014D_9606 lncRNA 673 2

LncBook: HSALNT0191100,

NONCODE: NONHSAT163717.1,

URS00009C28CD_9606 lncRNA 563 2

LncBook: HSALNT0191098,

NONCODE: NONHSAT163716.1,

ENSG00000257764 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000257764 Gene

No ASD Table

Relevant External Links for ENSG00000257764 Gene

GeneLoc Exon Structure for
ENSG00000257764

No data available for mRNA/cDNA for ENSG00000257764 Gene

Expression for ENSG00000257764 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000257764 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000257764 Gene

This gene is overexpressed in Whole Blood (x27.4) and Minor Salivary Gland (x14.1).
genes like me logo Genes that share expression patterns with ENSG00000257764: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000257764 Gene

Orthologs for ENSG00000257764 Gene

Evolution for ENSG00000257764 Gene

ENSEMBL:
Gene Tree for ENSG00000257764 (if available)
TreeFam:
Gene Tree for ENSG00000257764 (if available)

No data available for Orthologs for ENSG00000257764 Gene

Paralogs for ENSG00000257764 Gene

No data available for Paralogs for ENSG00000257764 Gene

Variants for ENSG00000257764 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000257764 Gene

Disorders for ENSG00000257764 Gene

Additional Disease Information for ENSG00000257764

No disorders were found for ENSG00000257764 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000257764 Gene

Publications for ENSG00000257764 Gene

No publications were found for ENSG00000257764 Gene.

No data available for Mastermind for ENSG00000257764 Gene

Products for ENSG00000257764 Gene

Sources for ENSG00000257764 Gene